Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne4Q8BLR2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne4Q8BLR2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne4Q8BLR2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne4Q8BLR2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne4Q8BLR2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.59■□□□□ 0.57
Cpne4Q8BLR2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne4Q8BLR2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne4Q8BLR2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.59■□□□□ 0.57
Cpne4Q8BLR2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne4Q8BLR2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cpne4Q8BLR2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cpne4Q8BLR2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cpne4Q8BLR2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpne4Q8BLR2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cpne4Q8BLR2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.58■□□□□ 0.56
Cpne4Q8BLR2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cpne4Q8BLR2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cpne4Q8BLR2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpne4Q8BLR2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpne4Q8BLR2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpne4Q8BLR2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cpne4Q8BLR2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpne4Q8BLR2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.57■□□□□ 0.56
Cpne4Q8BLR2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.57■□□□□ 0.56
Cpne4Q8BLR2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cpne4Q8BLR2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpne4Q8BLR2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpne4Q8BLR2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cpne4Q8BLR2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cpne4Q8BLR2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpne4Q8BLR2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cpne4Q8BLR2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cpne4Q8BLR2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpne4Q8BLR2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpne4Q8BLR2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpne4Q8BLR2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpne4Q8BLR2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cpne4Q8BLR2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.55■□□□□ 0.56
Cpne4Q8BLR2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpne4Q8BLR2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cpne4Q8BLR2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpne4Q8BLR2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cpne4Q8BLR2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cpne4Q8BLR2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpne4Q8BLR2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.55■□□□□ 0.56
Cpne4Q8BLR2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpne4Q8BLR2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cpne4Q8BLR2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpne4Q8BLR2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cpne4Q8BLR2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cpne4Q8BLR2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cpne4Q8BLR2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpne4Q8BLR2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpne4Q8BLR2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.54■□□□□ 0.56
Cpne4Q8BLR2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpne4Q8BLR2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cpne4Q8BLR2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpne4Q8BLR2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cpne4Q8BLR2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cpne4Q8BLR2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpne4Q8BLR2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cpne4Q8BLR2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cpne4Q8BLR2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpne4Q8BLR2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.53■□□□□ 0.56
Cpne4Q8BLR2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpne4Q8BLR2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cpne4Q8BLR2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.52■□□□□ 0.56
Cpne4Q8BLR2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpne4Q8BLR2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpne4Q8BLR2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpne4Q8BLR2 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.52■□□□□ 0.56
Cpne4Q8BLR2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.52■□□□□ 0.55
Cpne4Q8BLR2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Cpne4Q8BLR2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Cpne4Q8BLR2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne4Q8BLR2 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.51■□□□□ 0.55
Cpne4Q8BLR2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne4Q8BLR2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne4Q8BLR2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne4Q8BLR2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.51■□□□□ 0.55
Cpne4Q8BLR2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne4Q8BLR2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne4Q8BLR2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne4Q8BLR2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne4Q8BLR2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne4Q8BLR2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne4Q8BLR2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne4Q8BLR2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne4Q8BLR2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne4Q8BLR2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.5■□□□□ 0.55
Cpne4Q8BLR2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cpne4Q8BLR2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne4Q8BLR2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpne4Q8BLR2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Cpne4Q8BLR2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpne4Q8BLR2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpne4Q8BLR2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cpne4Q8BLR2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.49■□□□□ 0.55
Cpne4Q8BLR2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms