Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdkl3Q8BLF2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdkl3Q8BLF2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdkl3Q8BLF2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
Cdkl3Q8BLF2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdkl3Q8BLF2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.83■□□□□ 0.44
Cdkl3Q8BLF2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdkl3Q8BLF2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdkl3Q8BLF2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdkl3Q8BLF2 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.83■□□□□ 0.44
Cdkl3Q8BLF2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdkl3Q8BLF2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdkl3Q8BLF2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkl3Q8BLF2 Gm6821-201ENSMUST00000107540 542 ntBASIC17.82■□□□□ 0.44
Cdkl3Q8BLF2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdkl3Q8BLF2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkl3Q8BLF2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkl3Q8BLF2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkl3Q8BLF2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkl3Q8BLF2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkl3Q8BLF2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkl3Q8BLF2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cdkl3Q8BLF2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Cdkl3Q8BLF2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkl3Q8BLF2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkl3Q8BLF2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cdkl3Q8BLF2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.81■□□□□ 0.44
Cdkl3Q8BLF2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkl3Q8BLF2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.81■□□□□ 0.44
Cdkl3Q8BLF2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkl3Q8BLF2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cdkl3Q8BLF2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkl3Q8BLF2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cdkl3Q8BLF2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkl3Q8BLF2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkl3Q8BLF2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkl3Q8BLF2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkl3Q8BLF2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkl3Q8BLF2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cdkl3Q8BLF2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.79■□□□□ 0.44
Cdkl3Q8BLF2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkl3Q8BLF2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.78■□□□□ 0.44
Cdkl3Q8BLF2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkl3Q8BLF2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cdkl3Q8BLF2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkl3Q8BLF2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkl3Q8BLF2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cdkl3Q8BLF2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdkl3Q8BLF2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Cdkl3Q8BLF2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cdkl3Q8BLF2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdkl3Q8BLF2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cdkl3Q8BLF2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cdkl3Q8BLF2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdkl3Q8BLF2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdkl3Q8BLF2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkl3Q8BLF2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkl3Q8BLF2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkl3Q8BLF2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkl3Q8BLF2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkl3Q8BLF2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkl3Q8BLF2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkl3Q8BLF2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkl3Q8BLF2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.75■□□□□ 0.43
Cdkl3Q8BLF2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdkl3Q8BLF2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cdkl3Q8BLF2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdkl3Q8BLF2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cdkl3Q8BLF2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdkl3Q8BLF2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cdkl3Q8BLF2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdkl3Q8BLF2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdkl3Q8BLF2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdkl3Q8BLF2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.74■□□□□ 0.43
Cdkl3Q8BLF2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cdkl3Q8BLF2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.74■□□□□ 0.43
Cdkl3Q8BLF2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdkl3Q8BLF2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdkl3Q8BLF2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdkl3Q8BLF2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Cdkl3Q8BLF2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
Cdkl3Q8BLF2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms