Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc40Q8BI79 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc40Q8BI79 Gm5921-201ENSMUST00000075898 882 ntBASIC21.52■■□□□ 1.04
Ccdc40Q8BI79 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc40Q8BI79 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc40Q8BI79 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc40Q8BI79 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ccdc40Q8BI79 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.51■■□□□ 1.03
Ccdc40Q8BI79 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc40Q8BI79 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc40Q8BI79 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc40Q8BI79 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc40Q8BI79 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ccdc40Q8BI79 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.51■■□□□ 1.03
Ccdc40Q8BI79 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.51■■□□□ 1.03
Ccdc40Q8BI79 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc40Q8BI79 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc40Q8BI79 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc40Q8BI79 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc40Q8BI79 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc40Q8BI79 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc40Q8BI79 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc40Q8BI79 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.5■■□□□ 1.03
Ccdc40Q8BI79 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc40Q8BI79 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc40Q8BI79 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Ccdc40Q8BI79 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc40Q8BI79 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Ccdc40Q8BI79 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.5■■□□□ 1.03
Ccdc40Q8BI79 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.49■■□□□ 1.03
Ccdc40Q8BI79 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ccdc40Q8BI79 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc40Q8BI79 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.49■■□□□ 1.03
Ccdc40Q8BI79 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc40Q8BI79 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ccdc40Q8BI79 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc40Q8BI79 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Ccdc40Q8BI79 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc40Q8BI79 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc40Q8BI79 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ccdc40Q8BI79 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc40Q8BI79 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ccdc40Q8BI79 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc40Q8BI79 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ccdc40Q8BI79 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc40Q8BI79 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc40Q8BI79 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc40Q8BI79 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc40Q8BI79 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc40Q8BI79 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.47■■□□□ 1.03
Ccdc40Q8BI79 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc40Q8BI79 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc40Q8BI79 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc40Q8BI79 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc40Q8BI79 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc40Q8BI79 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.46■■□□□ 1.03
Ccdc40Q8BI79 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc40Q8BI79 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Ccdc40Q8BI79 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc40Q8BI79 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc40Q8BI79 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc40Q8BI79 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc40Q8BI79 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ccdc40Q8BI79 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.45■■□□□ 1.02
Ccdc40Q8BI79 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.45■■□□□ 1.02
Ccdc40Q8BI79 Gm43566-201ENSMUST00000196851 808 ntBASIC21.45■■□□□ 1.02
Ccdc40Q8BI79 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.45■■□□□ 1.02
Ccdc40Q8BI79 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ccdc40Q8BI79 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc40Q8BI79 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc40Q8BI79 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc40Q8BI79 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ccdc40Q8BI79 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Ccdc40Q8BI79 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Ccdc40Q8BI79 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc40Q8BI79 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc40Q8BI79 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Ccdc40Q8BI79 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.44■■□□□ 1.02
Ccdc40Q8BI79 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.44■■□□□ 1.02
Ccdc40Q8BI79 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc40Q8BI79 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc40Q8BI79 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.43■■□□□ 1.02
Ccdc40Q8BI79 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Ccdc40Q8BI79 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc40Q8BI79 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.43■■□□□ 1.02
Ccdc40Q8BI79 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ccdc40Q8BI79 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc40Q8BI79 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc40Q8BI79 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc40Q8BI79 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc40Q8BI79 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc40Q8BI79 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.42■■□□□ 1.02
Ccdc40Q8BI79 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc40Q8BI79 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc40Q8BI79 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc40Q8BI79 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc40Q8BI79 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc40Q8BI79 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc40Q8BI79 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc40Q8BI79 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms