Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.76■□□□□ 0.43
Ttc28Q80XJ3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc28Q80XJ3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc28Q80XJ3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc28Q80XJ3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc28Q80XJ3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc28Q80XJ3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ttc28Q80XJ3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.76■□□□□ 0.43
Ttc28Q80XJ3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc28Q80XJ3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ttc28Q80XJ3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.76■□□□□ 0.43
Ttc28Q80XJ3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ttc28Q80XJ3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc28Q80XJ3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc28Q80XJ3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ttc28Q80XJ3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ttc28Q80XJ3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc28Q80XJ3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc28Q80XJ3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc28Q80XJ3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc28Q80XJ3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc28Q80XJ3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc28Q80XJ3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc28Q80XJ3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ttc28Q80XJ3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.73■□□□□ 0.43
Ttc28Q80XJ3 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.73■□□□□ 0.43
Ttc28Q80XJ3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc28Q80XJ3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc28Q80XJ3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ttc28Q80XJ3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ttc28Q80XJ3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc28Q80XJ3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc28Q80XJ3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.72■□□□□ 0.43
Ttc28Q80XJ3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.72■□□□□ 0.43
Ttc28Q80XJ3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
Ttc28Q80XJ3 Gm37179-201ENSMUST00000194862 823 ntBASIC17.72■□□□□ 0.43
Ttc28Q80XJ3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ttc28Q80XJ3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ttc28Q80XJ3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ttc28Q80XJ3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ttc28Q80XJ3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ttc28Q80XJ3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ttc28Q80XJ3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Ttc28Q80XJ3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Ttc28Q80XJ3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ttc28Q80XJ3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc28Q80XJ3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc28Q80XJ3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc28Q80XJ3 Gm26833-201ENSMUST00000180899 440 ntBASIC17.7■□□□□ 0.42
Ttc28Q80XJ3 Gm42642-201ENSMUST00000200683 355 ntBASIC17.7■□□□□ 0.42
Ttc28Q80XJ3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.7■□□□□ 0.42
Ttc28Q80XJ3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.7■□□□□ 0.42
Ttc28Q80XJ3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc28Q80XJ3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ttc28Q80XJ3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc28Q80XJ3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc28Q80XJ3 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.69■□□□□ 0.42
Ttc28Q80XJ3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc28Q80XJ3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc28Q80XJ3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc28Q80XJ3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc28Q80XJ3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc28Q80XJ3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc28Q80XJ3 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.69■□□□□ 0.42
Ttc28Q80XJ3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.69■□□□□ 0.42
Ttc28Q80XJ3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc28Q80XJ3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc28Q80XJ3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ttc28Q80XJ3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ttc28Q80XJ3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ttc28Q80XJ3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ttc28Q80XJ3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.68■□□□□ 0.42
Ttc28Q80XJ3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ttc28Q80XJ3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ttc28Q80XJ3 Gm7143-201ENSMUST00000222811 859 ntBASIC17.67■□□□□ 0.42
Ttc28Q80XJ3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ttc28Q80XJ3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Ttc28Q80XJ3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ttc28Q80XJ3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ttc28Q80XJ3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ttc28Q80XJ3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
Ttc28Q80XJ3 Gm42569-201ENSMUST00000200539 472 ntBASIC17.67■□□□□ 0.42
Ttc28Q80XJ3 Spcs1-204ENSMUST00000226782 949 ntBASIC17.67■□□□□ 0.42
Ttc28Q80XJ3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
Ttc28Q80XJ3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ttc28Q80XJ3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc28Q80XJ3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc28Q80XJ3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc28Q80XJ3 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.66■□□□□ 0.42
Ttc28Q80XJ3 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.66■□□□□ 0.42
Ttc28Q80XJ3 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.66■□□□□ 0.42
Ttc28Q80XJ3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.66■□□□□ 0.42
Ttc28Q80XJ3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc28Q80XJ3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.65■□□□□ 0.42
Ttc28Q80XJ3 Gm43060-201ENSMUST00000200621 289 ntBASIC17.65■□□□□ 0.42
Ttc28Q80XJ3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ttc28Q80XJ3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ttc28Q80XJ3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ttc28Q80XJ3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ttc28Q80XJ3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms