Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Lrrtm4Q80XG9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrtm4Q80XG9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrrtm4Q80XG9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrrtm4Q80XG9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrrtm4Q80XG9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrrtm4Q80XG9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lrrtm4Q80XG9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrrtm4Q80XG9 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.27■□□□□ 0.84
Lrrtm4Q80XG9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lrrtm4Q80XG9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.27■□□□□ 0.83
Lrrtm4Q80XG9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Lrrtm4Q80XG9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrrtm4Q80XG9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Lrrtm4Q80XG9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrrtm4Q80XG9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrrtm4Q80XG9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lrrtm4Q80XG9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lrrtm4Q80XG9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Lrrtm4Q80XG9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Lrrtm4Q80XG9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.26■□□□□ 0.83
Lrrtm4Q80XG9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Lrrtm4Q80XG9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrrtm4Q80XG9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Lrrtm4Q80XG9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrrtm4Q80XG9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Lrrtm4Q80XG9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lrrtm4Q80XG9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.24■□□□□ 0.83
Lrrtm4Q80XG9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lrrtm4Q80XG9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrrtm4Q80XG9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrrtm4Q80XG9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Lrrtm4Q80XG9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.24■□□□□ 0.83
Lrrtm4Q80XG9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrrtm4Q80XG9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Lrrtm4Q80XG9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Lrrtm4Q80XG9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.23■□□□□ 0.83
Lrrtm4Q80XG9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrrtm4Q80XG9 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.23■□□□□ 0.83
Lrrtm4Q80XG9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrrtm4Q80XG9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrrtm4Q80XG9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrrtm4Q80XG9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lrrtm4Q80XG9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.22■□□□□ 0.83
Lrrtm4Q80XG9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.22■□□□□ 0.83
Lrrtm4Q80XG9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrrtm4Q80XG9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lrrtm4Q80XG9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrrtm4Q80XG9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrrtm4Q80XG9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrrtm4Q80XG9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrrtm4Q80XG9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrrtm4Q80XG9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrrtm4Q80XG9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.2■□□□□ 0.82
Lrrtm4Q80XG9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lrrtm4Q80XG9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrrtm4Q80XG9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrrtm4Q80XG9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrrtm4Q80XG9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrrtm4Q80XG9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.19■□□□□ 0.82
Lrrtm4Q80XG9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrrtm4Q80XG9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrrtm4Q80XG9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrrtm4Q80XG9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Lrrtm4Q80XG9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrrtm4Q80XG9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lrrtm4Q80XG9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.18■□□□□ 0.82
Lrrtm4Q80XG9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrrtm4Q80XG9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrrtm4Q80XG9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrrtm4Q80XG9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrrtm4Q80XG9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lrrtm4Q80XG9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrrtm4Q80XG9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrrtm4Q80XG9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Lrrtm4Q80XG9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.17■□□□□ 0.82
Lrrtm4Q80XG9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lrrtm4Q80XG9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Lrrtm4Q80XG9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.17■□□□□ 0.82
Lrrtm4Q80XG9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrrtm4Q80XG9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.17■□□□□ 0.82
Lrrtm4Q80XG9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.17■□□□□ 0.82
Lrrtm4Q80XG9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lrrtm4Q80XG9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrrtm4Q80XG9 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.16■□□□□ 0.82
Lrrtm4Q80XG9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrrtm4Q80XG9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.16■□□□□ 0.82
Lrrtm4Q80XG9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrrtm4Q80XG9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Lrrtm4Q80XG9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrrtm4Q80XG9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrrtm4Q80XG9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrrtm4Q80XG9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrrtm4Q80XG9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrrtm4Q80XG9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrrtm4Q80XG9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lrrtm4Q80XG9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrrtm4Q80XG9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrrtm4Q80XG9 Gm12922-201ENSMUST00000120626 809 ntBASIC20.15■□□□□ 0.82
Lrrtm4Q80XG9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms