Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Abcf1Q6P542 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.17■■□□□ 1.3
Abcf1Q6P542 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.16■■□□□ 1.3
Abcf1Q6P542 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Abcf1Q6P542 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Abcf1Q6P542 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Abcf1Q6P542 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Abcf1Q6P542 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Abcf1Q6P542 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Abcf1Q6P542 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Abcf1Q6P542 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Abcf1Q6P542 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Abcf1Q6P542 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Abcf1Q6P542 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Abcf1Q6P542 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Abcf1Q6P542 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Abcf1Q6P542 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Abcf1Q6P542 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Abcf1Q6P542 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Abcf1Q6P542 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Abcf1Q6P542 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Abcf1Q6P542 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC23.15■■□□□ 1.3
Abcf1Q6P542 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Abcf1Q6P542 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Abcf1Q6P542 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Abcf1Q6P542 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Abcf1Q6P542 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Abcf1Q6P542 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Abcf1Q6P542 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.13■■□□□ 1.29
Abcf1Q6P542 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Abcf1Q6P542 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.13■■□□□ 1.29
Abcf1Q6P542 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Abcf1Q6P542 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Abcf1Q6P542 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
Abcf1Q6P542 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Abcf1Q6P542 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
Abcf1Q6P542 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Abcf1Q6P542 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Abcf1Q6P542 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Abcf1Q6P542 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Abcf1Q6P542 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Abcf1Q6P542 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Abcf1Q6P542 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Abcf1Q6P542 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.1■■□□□ 1.29
Abcf1Q6P542 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.1■■□□□ 1.29
Abcf1Q6P542 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Abcf1Q6P542 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Abcf1Q6P542 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Abcf1Q6P542 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Abcf1Q6P542 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Abcf1Q6P542 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC23.09■■□□□ 1.29
Abcf1Q6P542 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Abcf1Q6P542 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.09■■□□□ 1.29
Abcf1Q6P542 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.08■■□□□ 1.29
Abcf1Q6P542 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.08■■□□□ 1.29
Abcf1Q6P542 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.08■■□□□ 1.29
Abcf1Q6P542 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Abcf1Q6P542 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Abcf1Q6P542 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Abcf1Q6P542 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Abcf1Q6P542 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Abcf1Q6P542 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Abcf1Q6P542 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Abcf1Q6P542 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.07■■□□□ 1.28
Abcf1Q6P542 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Abcf1Q6P542 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Abcf1Q6P542 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Abcf1Q6P542 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Abcf1Q6P542 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
Abcf1Q6P542 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Abcf1Q6P542 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Abcf1Q6P542 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Abcf1Q6P542 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Abcf1Q6P542 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Abcf1Q6P542 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Abcf1Q6P542 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Abcf1Q6P542 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Abcf1Q6P542 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Abcf1Q6P542 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Abcf1Q6P542 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.05■■□□□ 1.28
Abcf1Q6P542 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.05■■□□□ 1.28
Abcf1Q6P542 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Abcf1Q6P542 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Abcf1Q6P542 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Abcf1Q6P542 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
Abcf1Q6P542 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Abcf1Q6P542 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Abcf1Q6P542 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Abcf1Q6P542 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Abcf1Q6P542 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Abcf1Q6P542 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Abcf1Q6P542 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.03■■□□□ 1.28
Abcf1Q6P542 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.02■■□□□ 1.28
Abcf1Q6P542 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.02■■□□□ 1.28
Abcf1Q6P542 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.02■■□□□ 1.28
Abcf1Q6P542 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.02■■□□□ 1.28
Abcf1Q6P542 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Abcf1Q6P542 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Abcf1Q6P542 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Abcf1Q6P542 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms