Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC25.13■■□□□ 1.61
Scn9aQ62205 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Scn9aQ62205 Gm10493-201ENSMUST00000097270 612 ntBASIC25.13■■□□□ 1.61
Scn9aQ62205 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Scn9aQ62205 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Scn9aQ62205 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Scn9aQ62205 Gm5576-201ENSMUST00000075809 1236 ntBASIC25.13■■□□□ 1.61
Scn9aQ62205 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scn9aQ62205 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scn9aQ62205 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scn9aQ62205 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Scn9aQ62205 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scn9aQ62205 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Scn9aQ62205 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Scn9aQ62205 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Scn9aQ62205 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC25.11■■□□□ 1.61
Scn9aQ62205 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Scn9aQ62205 Gm27011-201ENSMUST00000182352 972 ntBASIC25.11■■□□□ 1.61
Scn9aQ62205 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC25.11■■□□□ 1.61
Scn9aQ62205 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Scn9aQ62205 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Scn9aQ62205 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Scn9aQ62205 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Scn9aQ62205 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Scn9aQ62205 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC25.09■■□□□ 1.61
Scn9aQ62205 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Scn9aQ62205 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
Scn9aQ62205 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Scn9aQ62205 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Scn9aQ62205 Gm37179-201ENSMUST00000194862 823 ntBASIC25.08■■□□□ 1.61
Scn9aQ62205 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Scn9aQ62205 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Scn9aQ62205 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.61
Scn9aQ62205 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Scn9aQ62205 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC25.07■■□□□ 1.6
Scn9aQ62205 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Scn9aQ62205 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
Scn9aQ62205 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Scn9aQ62205 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
Scn9aQ62205 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC25.07■■□□□ 1.6
Scn9aQ62205 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Scn9aQ62205 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Scn9aQ62205 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Scn9aQ62205 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Scn9aQ62205 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Scn9aQ62205 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Scn9aQ62205 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Scn9aQ62205 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Scn9aQ62205 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Scn9aQ62205 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Scn9aQ62205 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Scn9aQ62205 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC25.05■■□□□ 1.6
Scn9aQ62205 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Scn9aQ62205 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC25.04■■□□□ 1.6
Scn9aQ62205 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC25.04■■□□□ 1.6
Scn9aQ62205 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Scn9aQ62205 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Scn9aQ62205 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Scn9aQ62205 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Scn9aQ62205 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Scn9aQ62205 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC25.03■■□□□ 1.6
Scn9aQ62205 AC112142.1-201ENSMUST00000228796 918 ntBASIC25.03■■□□□ 1.6
Scn9aQ62205 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Scn9aQ62205 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Scn9aQ62205 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scn9aQ62205 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scn9aQ62205 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scn9aQ62205 Cdc34b-202ENSMUST00000188741 1252 ntBASIC25.02■■□□□ 1.6
Scn9aQ62205 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scn9aQ62205 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Scn9aQ62205 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scn9aQ62205 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Scn9aQ62205 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Scn9aQ62205 AC115037.1-201ENSMUST00000223391 2173 ntBASIC25.02■■□□□ 1.6
Scn9aQ62205 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scn9aQ62205 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Scn9aQ62205 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC25.02■■□□□ 1.6
Scn9aQ62205 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Scn9aQ62205 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC25.01■■□□□ 1.59
Scn9aQ62205 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Scn9aQ62205 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Scn9aQ62205 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Scn9aQ62205 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Scn9aQ62205 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Scn9aQ62205 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
Scn9aQ62205 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Scn9aQ62205 Gm43759-201ENSMUST00000196925 1261 ntBASIC25■■□□□ 1.59
Scn9aQ62205 Gm42569-201ENSMUST00000200539 472 ntBASIC25■■□□□ 1.59
Scn9aQ62205 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Scn9aQ62205 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Scn9aQ62205 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Scn9aQ62205 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Scn9aQ62205 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Scn9aQ62205 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Scn9aQ62205 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Scn9aQ62205 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Scn9aQ62205 Gm26833-201ENSMUST00000180899 440 ntBASIC24.98■■□□□ 1.59
Scn9aQ62205 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Scn9aQ62205 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
Scn9aQ62205 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC24.98■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms