Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SspnQ62147 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SspnQ62147 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SspnQ62147 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SspnQ62147 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.26■□□□□ 0.35
SspnQ62147 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SspnQ62147 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.26■□□□□ 0.35
SspnQ62147 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SspnQ62147 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.26■□□□□ 0.35
SspnQ62147 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.26■□□□□ 0.35
SspnQ62147 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SspnQ62147 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SspnQ62147 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SspnQ62147 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SspnQ62147 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SspnQ62147 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.25■□□□□ 0.35
SspnQ62147 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SspnQ62147 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.25■□□□□ 0.35
SspnQ62147 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SspnQ62147 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SspnQ62147 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SspnQ62147 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SspnQ62147 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SspnQ62147 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SspnQ62147 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SspnQ62147 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SspnQ62147 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.24■□□□□ 0.35
SspnQ62147 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SspnQ62147 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SspnQ62147 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SspnQ62147 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SspnQ62147 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SspnQ62147 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.23■□□□□ 0.35
SspnQ62147 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SspnQ62147 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.23■□□□□ 0.35
SspnQ62147 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.23■□□□□ 0.35
SspnQ62147 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SspnQ62147 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SspnQ62147 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SspnQ62147 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SspnQ62147 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SspnQ62147 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SspnQ62147 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SspnQ62147 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SspnQ62147 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SspnQ62147 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SspnQ62147 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SspnQ62147 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SspnQ62147 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SspnQ62147 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.22■□□□□ 0.35
SspnQ62147 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.22■□□□□ 0.35
SspnQ62147 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SspnQ62147 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SspnQ62147 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SspnQ62147 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SspnQ62147 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SspnQ62147 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SspnQ62147 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SspnQ62147 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SspnQ62147 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SspnQ62147 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SspnQ62147 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SspnQ62147 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SspnQ62147 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SspnQ62147 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SspnQ62147 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
SspnQ62147 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SspnQ62147 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SspnQ62147 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SspnQ62147 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SspnQ62147 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.2■□□□□ 0.34
SspnQ62147 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SspnQ62147 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SspnQ62147 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SspnQ62147 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.2■□□□□ 0.34
SspnQ62147 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SspnQ62147 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SspnQ62147 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SspnQ62147 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SspnQ62147 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SspnQ62147 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.19■□□□□ 0.34
SspnQ62147 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SspnQ62147 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
SspnQ62147 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.19■□□□□ 0.34
SspnQ62147 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SspnQ62147 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.19■□□□□ 0.34
SspnQ62147 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SspnQ62147 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SspnQ62147 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SspnQ62147 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SspnQ62147 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SspnQ62147 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SspnQ62147 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SspnQ62147 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SspnQ62147 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SspnQ62147 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.18■□□□□ 0.34
SspnQ62147 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SspnQ62147 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SspnQ62147 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SspnQ62147 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms