Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Clcn4Q61418 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn4Q61418 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn4Q61418 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn4Q61418 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn4Q61418 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.02■□□□□ 0.64
Clcn4Q61418 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn4Q61418 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Clcn4Q61418 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn4Q61418 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.02■□□□□ 0.64
Clcn4Q61418 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.02■□□□□ 0.64
Clcn4Q61418 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
Clcn4Q61418 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clcn4Q61418 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clcn4Q61418 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn4Q61418 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.01■□□□□ 0.63
Clcn4Q61418 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn4Q61418 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.01■□□□□ 0.63
Clcn4Q61418 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn4Q61418 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Clcn4Q61418 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn4Q61418 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn4Q61418 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Clcn4Q61418 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn4Q61418 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Clcn4Q61418 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clcn4Q61418 Gm15820-201ENSMUST00000201566 728 ntBASIC19■□□□□ 0.63
Clcn4Q61418 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn4Q61418 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn4Q61418 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn4Q61418 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn4Q61418 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn4Q61418 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn4Q61418 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn4Q61418 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn4Q61418 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Clcn4Q61418 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
Clcn4Q61418 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Clcn4Q61418 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn4Q61418 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn4Q61418 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Clcn4Q61418 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn4Q61418 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn4Q61418 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.98■□□□□ 0.63
Clcn4Q61418 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn4Q61418 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn4Q61418 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn4Q61418 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Clcn4Q61418 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn4Q61418 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.97■□□□□ 0.63
Clcn4Q61418 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.97■□□□□ 0.63
Clcn4Q61418 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Clcn4Q61418 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.96■□□□□ 0.63
Clcn4Q61418 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn4Q61418 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn4Q61418 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn4Q61418 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.96■□□□□ 0.63
Clcn4Q61418 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.96■□□□□ 0.63
Clcn4Q61418 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.96■□□□□ 0.63
Clcn4Q61418 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn4Q61418 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn4Q61418 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn4Q61418 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Clcn4Q61418 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn4Q61418 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Clcn4Q61418 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn4Q61418 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn4Q61418 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Clcn4Q61418 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn4Q61418 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn4Q61418 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn4Q61418 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn4Q61418 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn4Q61418 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn4Q61418 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn4Q61418 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn4Q61418 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn4Q61418 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn4Q61418 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.94■□□□□ 0.62
Clcn4Q61418 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Clcn4Q61418 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.93■□□□□ 0.62
Clcn4Q61418 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.93■□□□□ 0.62
Clcn4Q61418 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn4Q61418 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn4Q61418 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn4Q61418 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn4Q61418 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn4Q61418 Gm13238-201ENSMUST00000117655 780 ntBASIC18.93■□□□□ 0.62
Clcn4Q61418 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Clcn4Q61418 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.93■□□□□ 0.62
Clcn4Q61418 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Clcn4Q61418 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn4Q61418 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn4Q61418 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Clcn4Q61418 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn4Q61418 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn4Q61418 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Clcn4Q61418 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn4Q61418 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn4Q61418 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms