Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Col11a1Q61245 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Col11a1Q61245 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Col11a1Q61245 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Col11a1Q61245 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Col11a1Q61245 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Col11a1Q61245 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Col11a1Q61245 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Col11a1Q61245 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Col11a1Q61245 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Col11a1Q61245 Gm4430-201ENSMUST00000192413 1943 ntBASIC24■■□□□ 1.43
Col11a1Q61245 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Col11a1Q61245 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC24■■□□□ 1.43
Col11a1Q61245 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.99■■□□□ 1.43
Col11a1Q61245 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col11a1Q61245 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Col11a1Q61245 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
Col11a1Q61245 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Col11a1Q61245 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.98■■□□□ 1.43
Col11a1Q61245 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Col11a1Q61245 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
Col11a1Q61245 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Col11a1Q61245 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
Col11a1Q61245 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Col11a1Q61245 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Col11a1Q61245 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Col11a1Q61245 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col11a1Q61245 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Col11a1Q61245 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.97■■□□□ 1.43
Col11a1Q61245 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col11a1Q61245 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col11a1Q61245 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Col11a1Q61245 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col11a1Q61245 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col11a1Q61245 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col11a1Q61245 Gm40848-201ENSMUST00000221998 324 ntBASIC23.96■■□□□ 1.43
Col11a1Q61245 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col11a1Q61245 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Col11a1Q61245 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Col11a1Q61245 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.95■■□□□ 1.42
Col11a1Q61245 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Col11a1Q61245 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Col11a1Q61245 Gm7143-201ENSMUST00000222811 859 ntBASIC23.94■■□□□ 1.42
Col11a1Q61245 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col11a1Q61245 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col11a1Q61245 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col11a1Q61245 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.94■■□□□ 1.42
Col11a1Q61245 CT025689.6-201ENSMUST00000224991 1104 ntBASIC23.94■■□□□ 1.42
Col11a1Q61245 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col11a1Q61245 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col11a1Q61245 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
Col11a1Q61245 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
Col11a1Q61245 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col11a1Q61245 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col11a1Q61245 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col11a1Q61245 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Col11a1Q61245 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Col11a1Q61245 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col11a1Q61245 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col11a1Q61245 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.91■■□□□ 1.42
Col11a1Q61245 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Col11a1Q61245 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Col11a1Q61245 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col11a1Q61245 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.9■■□□□ 1.42
Col11a1Q61245 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Col11a1Q61245 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Col11a1Q61245 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col11a1Q61245 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Col11a1Q61245 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.89■■□□□ 1.42
Col11a1Q61245 Gm43060-201ENSMUST00000200621 289 ntBASIC23.89■■□□□ 1.42
Col11a1Q61245 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Col11a1Q61245 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col11a1Q61245 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Col11a1Q61245 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Col11a1Q61245 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col11a1Q61245 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col11a1Q61245 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col11a1Q61245 Gm10033-202ENSMUST00000211874 928 ntBASIC23.88■■□□□ 1.41
Col11a1Q61245 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col11a1Q61245 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col11a1Q61245 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col11a1Q61245 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.87■■□□□ 1.41
Col11a1Q61245 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.87■■□□□ 1.41
Col11a1Q61245 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col11a1Q61245 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col11a1Q61245 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col11a1Q61245 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col11a1Q61245 Gm43530-201ENSMUST00000195920 274 ntBASIC23.87■■□□□ 1.41
Col11a1Q61245 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Col11a1Q61245 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Col11a1Q61245 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Col11a1Q61245 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.86■■□□□ 1.41
Col11a1Q61245 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Col11a1Q61245 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col11a1Q61245 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col11a1Q61245 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col11a1Q61245 Gm42642-201ENSMUST00000200683 355 ntBASIC23.84■■□□□ 1.41
Col11a1Q61245 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col11a1Q61245 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col11a1Q61245 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms