Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ClpbQ60649 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ClpbQ60649 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ClpbQ60649 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ClpbQ60649 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
ClpbQ60649 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ClpbQ60649 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ClpbQ60649 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ClpbQ60649 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.87■□□□□ 0.77
ClpbQ60649 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.87■□□□□ 0.77
ClpbQ60649 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ClpbQ60649 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ClpbQ60649 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ClpbQ60649 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ClpbQ60649 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClpbQ60649 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClpbQ60649 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClpbQ60649 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
ClpbQ60649 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ClpbQ60649 Etf1-202ENSMUST00000180351 108 ntBASIC19.86■□□□□ 0.77
ClpbQ60649 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ClpbQ60649 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClpbQ60649 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClpbQ60649 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClpbQ60649 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClpbQ60649 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClpbQ60649 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
ClpbQ60649 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ClpbQ60649 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ClpbQ60649 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ClpbQ60649 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ClpbQ60649 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ClpbQ60649 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ClpbQ60649 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClpbQ60649 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClpbQ60649 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.84■□□□□ 0.77
ClpbQ60649 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClpbQ60649 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.84■□□□□ 0.77
ClpbQ60649 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClpbQ60649 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClpbQ60649 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClpbQ60649 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
ClpbQ60649 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.83■□□□□ 0.76
ClpbQ60649 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ClpbQ60649 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ClpbQ60649 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ClpbQ60649 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ClpbQ60649 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ClpbQ60649 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.83■□□□□ 0.76
ClpbQ60649 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClpbQ60649 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClpbQ60649 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClpbQ60649 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.82■□□□□ 0.76
ClpbQ60649 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.82■□□□□ 0.76
ClpbQ60649 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ClpbQ60649 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.82■□□□□ 0.76
ClpbQ60649 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClpbQ60649 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClpbQ60649 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ClpbQ60649 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ClpbQ60649 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClpbQ60649 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClpbQ60649 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ClpbQ60649 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.81■□□□□ 0.76
ClpbQ60649 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClpbQ60649 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClpbQ60649 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClpbQ60649 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClpbQ60649 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClpbQ60649 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClpbQ60649 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ClpbQ60649 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.8■□□□□ 0.76
ClpbQ60649 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
ClpbQ60649 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ClpbQ60649 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ClpbQ60649 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.8■□□□□ 0.76
ClpbQ60649 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
ClpbQ60649 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.8■□□□□ 0.76
ClpbQ60649 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClpbQ60649 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClpbQ60649 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ClpbQ60649 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClpbQ60649 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClpbQ60649 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClpbQ60649 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClpbQ60649 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClpbQ60649 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClpbQ60649 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClpbQ60649 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClpbQ60649 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClpbQ60649 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClpbQ60649 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ClpbQ60649 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClpbQ60649 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
ClpbQ60649 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClpbQ60649 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClpbQ60649 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.78■□□□□ 0.76
ClpbQ60649 Gm7417-201ENSMUST00000192950 473 ntBASIC19.78■□□□□ 0.76
ClpbQ60649 Gm10399-202ENSMUST00000202768 748 ntBASIC19.78■□□□□ 0.76
ClpbQ60649 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms