Protein–RNA interactions for Protein: Q60644

Nr1h2, Oxysterols receptor LXR-beta, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h2Q60644 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nr1h2Q60644 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nr1h2Q60644 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nr1h2Q60644 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nr1h2Q60644 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nr1h2Q60644 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nr1h2Q60644 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nr1h2Q60644 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Nr1h2Q60644 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nr1h2Q60644 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nr1h2Q60644 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nr1h2Q60644 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Nr1h2Q60644 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nr1h2Q60644 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nr1h2Q60644 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nr1h2Q60644 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nr1h2Q60644 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nr1h2Q60644 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.2■□□□□ 0.82
Nr1h2Q60644 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nr1h2Q60644 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nr1h2Q60644 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nr1h2Q60644 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nr1h2Q60644 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nr1h2Q60644 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nr1h2Q60644 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
Nr1h2Q60644 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Nr1h2Q60644 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.19■□□□□ 0.82
Nr1h2Q60644 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.19■□□□□ 0.82
Nr1h2Q60644 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nr1h2Q60644 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Nr1h2Q60644 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.18■□□□□ 0.82
Nr1h2Q60644 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nr1h2Q60644 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nr1h2Q60644 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nr1h2Q60644 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Nr1h2Q60644 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.17■□□□□ 0.82
Nr1h2Q60644 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr1h2Q60644 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Nr1h2Q60644 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr1h2Q60644 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr1h2Q60644 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Nr1h2Q60644 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr1h2Q60644 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr1h2Q60644 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1h2Q60644 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1h2Q60644 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1h2Q60644 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Nr1h2Q60644 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.16■□□□□ 0.82
Nr1h2Q60644 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1h2Q60644 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1h2Q60644 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1h2Q60644 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1h2Q60644 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h2Q60644 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Nr1h2Q60644 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h2Q60644 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h2Q60644 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.15■□□□□ 0.82
Nr1h2Q60644 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h2Q60644 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h2Q60644 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.15■□□□□ 0.82
Nr1h2Q60644 Gm9959-201ENSMUST00000068277 390 ntBASIC20.15■□□□□ 0.82
Nr1h2Q60644 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h2Q60644 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.15■□□□□ 0.82
Nr1h2Q60644 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h2Q60644 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Nr1h2Q60644 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h2Q60644 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Nr1h2Q60644 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1h2Q60644 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Nr1h2Q60644 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Nr1h2Q60644 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1h2Q60644 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1h2Q60644 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1h2Q60644 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1h2Q60644 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1h2Q60644 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1h2Q60644 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1h2Q60644 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1h2Q60644 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1h2Q60644 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.13■□□□□ 0.81
Nr1h2Q60644 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.13■□□□□ 0.81
Nr1h2Q60644 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.13■□□□□ 0.81
Nr1h2Q60644 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1h2Q60644 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1h2Q60644 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1h2Q60644 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1h2Q60644 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1h2Q60644 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1h2Q60644 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1h2Q60644 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1h2Q60644 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1h2Q60644 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1h2Q60644 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1h2Q60644 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1h2Q60644 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.11■□□□□ 0.81
Nr1h2Q60644 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1h2Q60644 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1h2Q60644 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1h2Q60644 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.1■□□□□ 0.81
Nr1h2Q60644 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms