Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC37.54■■■■□ 3.6
Pds5bQ4VA53 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC37.53■■■■□ 3.6
Pds5bQ4VA53 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Pds5bQ4VA53 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC37.53■■■■□ 3.6
Pds5bQ4VA53 Gm10602-201ENSMUST00000098239 609 ntBASIC37.53■■■■□ 3.6
Pds5bQ4VA53 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
Pds5bQ4VA53 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC37.52■■■■□ 3.6
Pds5bQ4VA53 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC37.52■■■■□ 3.6
Pds5bQ4VA53 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC37.51■■■■□ 3.6
Pds5bQ4VA53 Smad6-203ENSMUST00000179458 273 ntBASIC37.51■■■■□ 3.59
Pds5bQ4VA53 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC37.51■■■■□ 3.59
Pds5bQ4VA53 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC37.51■■■■□ 3.59
Pds5bQ4VA53 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.59
Pds5bQ4VA53 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC37.5■■■■□ 3.59
Pds5bQ4VA53 Nespas-201ENSMUST00000143738 1083 ntBASIC37.5■■■■□ 3.59
Pds5bQ4VA53 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC37.5■■■■□ 3.59
Pds5bQ4VA53 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC37.49■■■■□ 3.59
Pds5bQ4VA53 AC158990.1-201ENSMUST00000221450 2016 ntBASIC37.49■■■■□ 3.59
Pds5bQ4VA53 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC37.49■■■■□ 3.59
Pds5bQ4VA53 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
Pds5bQ4VA53 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
Pds5bQ4VA53 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC37.48■■■■□ 3.59
Pds5bQ4VA53 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC37.48■■■■□ 3.59
Pds5bQ4VA53 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC37.47■■■■□ 3.59
Pds5bQ4VA53 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC37.47■■■■□ 3.59
Pds5bQ4VA53 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
Pds5bQ4VA53 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC37.46■■■■□ 3.59
Pds5bQ4VA53 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC37.46■■■■□ 3.59
Pds5bQ4VA53 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC37.46■■■■□ 3.59
Pds5bQ4VA53 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
Pds5bQ4VA53 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
Pds5bQ4VA53 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC37.46■■■■□ 3.59
Pds5bQ4VA53 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC37.46■■■■□ 3.59
Pds5bQ4VA53 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC37.46■■■■□ 3.59
Pds5bQ4VA53 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC37.45■■■■□ 3.59
Pds5bQ4VA53 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
Pds5bQ4VA53 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC37.45■■■■□ 3.59
Pds5bQ4VA53 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
Pds5bQ4VA53 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
Pds5bQ4VA53 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC37.44■■■■□ 3.58
Pds5bQ4VA53 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
Pds5bQ4VA53 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
Pds5bQ4VA53 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC37.43■■■■□ 3.58
Pds5bQ4VA53 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC37.43■■■■□ 3.58
Pds5bQ4VA53 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
Pds5bQ4VA53 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC37.42■■■■□ 3.58
Pds5bQ4VA53 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC37.42■■■■□ 3.58
Pds5bQ4VA53 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
Pds5bQ4VA53 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
Pds5bQ4VA53 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC37.42■■■■□ 3.58
Pds5bQ4VA53 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC37.42■■■■□ 3.58
Pds5bQ4VA53 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC37.42■■■■□ 3.58
Pds5bQ4VA53 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
Pds5bQ4VA53 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
Pds5bQ4VA53 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
Pds5bQ4VA53 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
Pds5bQ4VA53 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC37.41■■■■□ 3.58
Pds5bQ4VA53 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC37.41■■■■□ 3.58
Pds5bQ4VA53 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
Pds5bQ4VA53 Kdm3b-204ENSMUST00000224715 2032 ntBASIC37.4■■■■□ 3.58
Pds5bQ4VA53 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC37.39■■■■□ 3.58
Pds5bQ4VA53 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC37.39■■■■□ 3.58
Pds5bQ4VA53 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC37.39■■■■□ 3.58
Pds5bQ4VA53 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC37.39■■■■□ 3.58
Pds5bQ4VA53 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC37.39■■■■□ 3.58
Pds5bQ4VA53 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC37.38■■■■□ 3.57
Pds5bQ4VA53 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
Pds5bQ4VA53 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
Pds5bQ4VA53 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC37.37■■■■□ 3.57
Pds5bQ4VA53 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
Pds5bQ4VA53 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC37.37■■■■□ 3.57
Pds5bQ4VA53 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
Pds5bQ4VA53 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
Pds5bQ4VA53 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC37.37■■■■□ 3.57
Pds5bQ4VA53 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
Pds5bQ4VA53 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
Pds5bQ4VA53 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
Pds5bQ4VA53 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
Pds5bQ4VA53 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
Pds5bQ4VA53 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC37.34■■■■□ 3.57
Pds5bQ4VA53 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC37.34■■■■□ 3.57
Pds5bQ4VA53 Gm4430-201ENSMUST00000192413 1943 ntBASIC37.33■■■■□ 3.57
Pds5bQ4VA53 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
Pds5bQ4VA53 AC166356.1-201ENSMUST00000228236 1426 ntBASIC37.33■■■■□ 3.57
Pds5bQ4VA53 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC37.33■■■■□ 3.57
Pds5bQ4VA53 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC37.33■■■■□ 3.57
Pds5bQ4VA53 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC37.33■■■■□ 3.57
Pds5bQ4VA53 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
Pds5bQ4VA53 Gm42699-201ENSMUST00000198104 1657 ntBASIC37.32■■■■□ 3.57
Pds5bQ4VA53 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC37.32■■■■□ 3.56
Pds5bQ4VA53 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.56
Pds5bQ4VA53 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC37.31■■■■□ 3.56
Pds5bQ4VA53 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC37.31■■■■□ 3.56
Pds5bQ4VA53 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
Pds5bQ4VA53 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC37.31■■■■□ 3.56
Pds5bQ4VA53 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC37.31■■■■□ 3.56
Pds5bQ4VA53 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC37.3■■■■□ 3.56
Pds5bQ4VA53 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC37.3■■■■□ 3.56
Pds5bQ4VA53 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
Pds5bQ4VA53 Gm43530-201ENSMUST00000195920 274 ntBASIC37.29■■■■□ 3.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms