Protein–RNA interactions for Protein: Q3UW50

Gm27235, Predicted gene 27235, mousemouse

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm27235Q3UW50 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm27235Q3UW50 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC12.85□□□□□ -0.35
Gm27235Q3UW50 Nsd1-203ENSMUST00000224156 1149 ntBASIC12.85□□□□□ -0.35
Gm27235Q3UW50 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm27235Q3UW50 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Gm27235Q3UW50 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Gm27235Q3UW50 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm27235Q3UW50 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm27235Q3UW50 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm27235Q3UW50 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm27235Q3UW50 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm27235Q3UW50 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm27235Q3UW50 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm27235Q3UW50 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm27235Q3UW50 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm27235Q3UW50 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Gm27235Q3UW50 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gm27235Q3UW50 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm27235Q3UW50 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm27235Q3UW50 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm27235Q3UW50 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm27235Q3UW50 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm27235Q3UW50 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm27235Q3UW50 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gm27235Q3UW50 Gm5913-201ENSMUST00000119397 1399 ntBASIC12.83□□□□□ -0.36
Gm27235Q3UW50 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm27235Q3UW50 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm27235Q3UW50 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Gm27235Q3UW50 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Gm27235Q3UW50 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Gm27235Q3UW50 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Gm27235Q3UW50 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Gm27235Q3UW50 Gm44949-201ENSMUST00000206423 1450 ntBASIC12.83□□□□□ -0.36
Gm27235Q3UW50 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Gm27235Q3UW50 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Gm27235Q3UW50 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm27235Q3UW50 Gm8093-201ENSMUST00000128935 1892 ntBASIC12.82□□□□□ -0.36
Gm27235Q3UW50 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm27235Q3UW50 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm27235Q3UW50 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm27235Q3UW50 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm27235Q3UW50 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm27235Q3UW50 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm27235Q3UW50 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC12.82□□□□□ -0.36
Gm27235Q3UW50 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC12.82□□□□□ -0.36
Gm27235Q3UW50 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm27235Q3UW50 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm27235Q3UW50 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC12.82□□□□□ -0.36
Gm27235Q3UW50 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm27235Q3UW50 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm27235Q3UW50 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm27235Q3UW50 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm27235Q3UW50 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm27235Q3UW50 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm27235Q3UW50 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm27235Q3UW50 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm27235Q3UW50 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC12.81□□□□□ -0.36
Gm27235Q3UW50 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm27235Q3UW50 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm27235Q3UW50 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC12.81□□□□□ -0.36
Gm27235Q3UW50 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC12.81□□□□□ -0.36
Gm27235Q3UW50 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Gm27235Q3UW50 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm27235Q3UW50 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm27235Q3UW50 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm27235Q3UW50 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm27235Q3UW50 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm27235Q3UW50 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm27235Q3UW50 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm27235Q3UW50 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm27235Q3UW50 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm27235Q3UW50 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm27235Q3UW50 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm27235Q3UW50 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm27235Q3UW50 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm27235Q3UW50 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm27235Q3UW50 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gm27235Q3UW50 Gm5921-201ENSMUST00000075898 882 ntBASIC12.8□□□□□ -0.36
Gm27235Q3UW50 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm27235Q3UW50 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm27235Q3UW50 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm27235Q3UW50 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm27235Q3UW50 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm27235Q3UW50 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gm27235Q3UW50 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm27235Q3UW50 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm27235Q3UW50 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm27235Q3UW50 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm27235Q3UW50 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gm27235Q3UW50 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm27235Q3UW50 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm27235Q3UW50 Gm43006-201ENSMUST00000197702 1602 ntBASIC12.78□□□□□ -0.36
Gm27235Q3UW50 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm27235Q3UW50 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm27235Q3UW50 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm27235Q3UW50 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm27235Q3UW50 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm27235Q3UW50 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm27235Q3UW50 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Gm27235Q3UW50 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms