Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf44Q3UHJ8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf44Q3UHJ8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.1■□□□□ 0.81
Rnf44Q3UHJ8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf44Q3UHJ8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf44Q3UHJ8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf44Q3UHJ8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf44Q3UHJ8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf44Q3UHJ8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rnf44Q3UHJ8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf44Q3UHJ8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rnf44Q3UHJ8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rnf44Q3UHJ8 Etf1-202ENSMUST00000180351 108 ntBASIC20.09■□□□□ 0.81
Rnf44Q3UHJ8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf44Q3UHJ8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf44Q3UHJ8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf44Q3UHJ8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf44Q3UHJ8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf44Q3UHJ8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf44Q3UHJ8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.08■□□□□ 0.81
Rnf44Q3UHJ8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf44Q3UHJ8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf44Q3UHJ8 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.08■□□□□ 0.8
Rnf44Q3UHJ8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Rnf44Q3UHJ8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf44Q3UHJ8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf44Q3UHJ8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.07■□□□□ 0.8
Rnf44Q3UHJ8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.07■□□□□ 0.8
Rnf44Q3UHJ8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf44Q3UHJ8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.07■□□□□ 0.8
Rnf44Q3UHJ8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf44Q3UHJ8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rnf44Q3UHJ8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf44Q3UHJ8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf44Q3UHJ8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf44Q3UHJ8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf44Q3UHJ8 Gm14117-201ENSMUST00000122417 843 ntBASIC20.06■□□□□ 0.8
Rnf44Q3UHJ8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Rnf44Q3UHJ8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rnf44Q3UHJ8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf44Q3UHJ8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf44Q3UHJ8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf44Q3UHJ8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf44Q3UHJ8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf44Q3UHJ8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf44Q3UHJ8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf44Q3UHJ8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf44Q3UHJ8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf44Q3UHJ8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf44Q3UHJ8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rnf44Q3UHJ8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf44Q3UHJ8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf44Q3UHJ8 Gm7417-201ENSMUST00000192950 473 ntBASIC20.04■□□□□ 0.8
Rnf44Q3UHJ8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf44Q3UHJ8 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.04■□□□□ 0.8
Rnf44Q3UHJ8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf44Q3UHJ8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf44Q3UHJ8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf44Q3UHJ8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf44Q3UHJ8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf44Q3UHJ8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf44Q3UHJ8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf44Q3UHJ8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf44Q3UHJ8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf44Q3UHJ8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rnf44Q3UHJ8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.03■□□□□ 0.8
Rnf44Q3UHJ8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.03■□□□□ 0.8
Rnf44Q3UHJ8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.03■□□□□ 0.8
Rnf44Q3UHJ8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf44Q3UHJ8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
Rnf44Q3UHJ8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rnf44Q3UHJ8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf44Q3UHJ8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.02■□□□□ 0.8
Rnf44Q3UHJ8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf44Q3UHJ8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.01■□□□□ 0.79
Rnf44Q3UHJ8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.01■□□□□ 0.79
Rnf44Q3UHJ8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf44Q3UHJ8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.01■□□□□ 0.79
Rnf44Q3UHJ8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rnf44Q3UHJ8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf44Q3UHJ8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf44Q3UHJ8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf44Q3UHJ8 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.99■□□□□ 0.79
Rnf44Q3UHJ8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.99■□□□□ 0.79
Rnf44Q3UHJ8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Rnf44Q3UHJ8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.99■□□□□ 0.79
Rnf44Q3UHJ8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rnf44Q3UHJ8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
Rnf44Q3UHJ8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf44Q3UHJ8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf44Q3UHJ8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Rnf44Q3UHJ8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf44Q3UHJ8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf44Q3UHJ8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf44Q3UHJ8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf44Q3UHJ8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf44Q3UHJ8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf44Q3UHJ8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf44Q3UHJ8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf44Q3UHJ8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms