Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops9Q3U898 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops9Q3U898 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops9Q3U898 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cops9Q3U898 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops9Q3U898 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops9Q3U898 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops9Q3U898 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops9Q3U898 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops9Q3U898 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Cops9Q3U898 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC14.34□□□□□ -0.11
Cops9Q3U898 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops9Q3U898 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cops9Q3U898 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops9Q3U898 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cops9Q3U898 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cops9Q3U898 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops9Q3U898 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops9Q3U898 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.33□□□□□ -0.12
Cops9Q3U898 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.33□□□□□ -0.12
Cops9Q3U898 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cops9Q3U898 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops9Q3U898 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cops9Q3U898 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops9Q3U898 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cops9Q3U898 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops9Q3U898 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cops9Q3U898 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cops9Q3U898 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops9Q3U898 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops9Q3U898 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops9Q3U898 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cops9Q3U898 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops9Q3U898 Zfp131-205ENSMUST00000223812 663 ntBASIC14.31□□□□□ -0.12
Cops9Q3U898 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops9Q3U898 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops9Q3U898 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops9Q3U898 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops9Q3U898 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops9Q3U898 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops9Q3U898 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops9Q3U898 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cops9Q3U898 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops9Q3U898 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops9Q3U898 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops9Q3U898 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC14.3□□□□□ -0.12
Cops9Q3U898 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops9Q3U898 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops9Q3U898 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops9Q3U898 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Cops9Q3U898 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops9Q3U898 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cops9Q3U898 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.28□□□□□ -0.12
Cops9Q3U898 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops9Q3U898 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops9Q3U898 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops9Q3U898 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops9Q3U898 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops9Q3U898 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops9Q3U898 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cops9Q3U898 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cops9Q3U898 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cops9Q3U898 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.27□□□□□ -0.13
Cops9Q3U898 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cops9Q3U898 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cops9Q3U898 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cops9Q3U898 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops9Q3U898 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cops9Q3U898 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops9Q3U898 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops9Q3U898 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops9Q3U898 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops9Q3U898 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Cops9Q3U898 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops9Q3U898 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops9Q3U898 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops9Q3U898 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops9Q3U898 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.26□□□□□ -0.13
Cops9Q3U898 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cops9Q3U898 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC14.26□□□□□ -0.13
Cops9Q3U898 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops9Q3U898 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.26□□□□□ -0.13
Cops9Q3U898 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops9Q3U898 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops9Q3U898 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops9Q3U898 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops9Q3U898 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops9Q3U898 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cops9Q3U898 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops9Q3U898 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops9Q3U898 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops9Q3U898 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cops9Q3U898 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cops9Q3U898 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC14.24□□□□□ -0.13
Cops9Q3U898 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops9Q3U898 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cops9Q3U898 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops9Q3U898 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cops9Q3U898 Gm7199-201ENSMUST00000118327 1485 ntBASIC14.24□□□□□ -0.13
Cops9Q3U898 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms