Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.26■□□□□ 0.51
Hist1h3bP84228 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h3bP84228 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.26■□□□□ 0.51
Hist1h3bP84228 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h3bP84228 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h3bP84228 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h3bP84228 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h3bP84228 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h3bP84228 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3bP84228 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3bP84228 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Hist1h3bP84228 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3bP84228 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3bP84228 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3bP84228 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3bP84228 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3bP84228 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3bP84228 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3bP84228 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Hist1h3bP84228 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3bP84228 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.25■□□□□ 0.51
Hist1h3bP84228 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h3bP84228 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h3bP84228 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h3bP84228 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h3bP84228 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Hist1h3bP84228 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Hist1h3bP84228 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h3bP84228 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.24■□□□□ 0.51
Hist1h3bP84228 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Hist1h3bP84228 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h3bP84228 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h3bP84228 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h3bP84228 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h3bP84228 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Hist1h3bP84228 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h3bP84228 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Hist1h3bP84228 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Hist1h3bP84228 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h3bP84228 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h3bP84228 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.22■□□□□ 0.51
Hist1h3bP84228 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Hist1h3bP84228 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h3bP84228 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h3bP84228 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h3bP84228 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Hist1h3bP84228 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h3bP84228 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.22■□□□□ 0.51
Hist1h3bP84228 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.22■□□□□ 0.51
Hist1h3bP84228 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Hist1h3bP84228 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h3bP84228 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h3bP84228 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h3bP84228 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h3bP84228 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h3bP84228 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h3bP84228 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Hist1h3bP84228 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h3bP84228 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.21■□□□□ 0.51
Hist1h3bP84228 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.21■□□□□ 0.51
Hist1h3bP84228 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h3bP84228 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h3bP84228 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Hist1h3bP84228 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hist1h3bP84228 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h3bP84228 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h3bP84228 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h3bP84228 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h3bP84228 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h3bP84228 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h3bP84228 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h3bP84228 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h3bP84228 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.19■□□□□ 0.5
Hist1h3bP84228 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h3bP84228 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Hist1h3bP84228 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h3bP84228 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Hist1h3bP84228 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h3bP84228 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h3bP84228 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Hist1h3bP84228 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Hist1h3bP84228 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h3bP84228 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h3bP84228 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h3bP84228 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h3bP84228 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Hist1h3bP84228 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h3bP84228 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
Hist1h3bP84228 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hist1h3bP84228 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hist1h3bP84228 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Hist1h3bP84228 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.17■□□□□ 0.5
Hist1h3bP84228 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hist1h3bP84228 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Hist1h3bP84228 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hist1h3bP84228 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hist1h3bP84228 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Hist1h3bP84228 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hist1h3bP84228 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hist1h3bP84228 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms