Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six5P70178 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Six5P70178 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
Six5P70178 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six5P70178 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Six5P70178 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.44■□□□□ 0.7
Six5P70178 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six5P70178 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six5P70178 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six5P70178 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six5P70178 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Six5P70178 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six5P70178 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.43■□□□□ 0.7
Six5P70178 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six5P70178 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six5P70178 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six5P70178 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Six5P70178 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six5P70178 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.43■□□□□ 0.7
Six5P70178 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six5P70178 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six5P70178 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Six5P70178 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.42■□□□□ 0.7
Six5P70178 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six5P70178 Gm15820-201ENSMUST00000201566 728 ntBASIC19.42■□□□□ 0.7
Six5P70178 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Six5P70178 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six5P70178 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.42■□□□□ 0.7
Six5P70178 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Six5P70178 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Six5P70178 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Six5P70178 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six5P70178 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Six5P70178 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six5P70178 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six5P70178 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Six5P70178 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six5P70178 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Six5P70178 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.4■□□□□ 0.7
Six5P70178 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.4■□□□□ 0.7
Six5P70178 Gm40881-201ENSMUST00000223397 166 ntBASIC19.4■□□□□ 0.7
Six5P70178 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six5P70178 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six5P70178 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.4■□□□□ 0.7
Six5P70178 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six5P70178 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Six5P70178 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six5P70178 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.39■□□□□ 0.69
Six5P70178 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six5P70178 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six5P70178 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six5P70178 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six5P70178 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six5P70178 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.38■□□□□ 0.69
Six5P70178 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.38■□□□□ 0.69
Six5P70178 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Six5P70178 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Six5P70178 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Six5P70178 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Six5P70178 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Six5P70178 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.37■□□□□ 0.69
Six5P70178 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.37■□□□□ 0.69
Six5P70178 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Six5P70178 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six5P70178 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six5P70178 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six5P70178 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six5P70178 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six5P70178 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six5P70178 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Six5P70178 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Six5P70178 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Six5P70178 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Six5P70178 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six5P70178 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six5P70178 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six5P70178 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six5P70178 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six5P70178 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six5P70178 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six5P70178 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six5P70178 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.34■□□□□ 0.69
Six5P70178 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six5P70178 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six5P70178 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six5P70178 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six5P70178 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Six5P70178 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.34■□□□□ 0.69
Six5P70178 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six5P70178 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six5P70178 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Six5P70178 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Six5P70178 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Six5P70178 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Six5P70178 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Six5P70178 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Six5P70178 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Six5P70178 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Six5P70178 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six5P70178 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms