Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx1P63006 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.48■□□□□ 0.87
Lhx1P63006 Gm13241-201ENSMUST00000094493 780 ntBASIC20.48■□□□□ 0.87
Lhx1P63006 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx1P63006 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.48■□□□□ 0.87
Lhx1P63006 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx1P63006 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx1P63006 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.48■□□□□ 0.87
Lhx1P63006 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx1P63006 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx1P63006 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx1P63006 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
Lhx1P63006 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.47■□□□□ 0.87
Lhx1P63006 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx1P63006 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx1P63006 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx1P63006 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx1P63006 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx1P63006 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx1P63006 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.46■□□□□ 0.87
Lhx1P63006 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx1P63006 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.46■□□□□ 0.87
Lhx1P63006 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Lhx1P63006 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx1P63006 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx1P63006 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx1P63006 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx1P63006 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx1P63006 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx1P63006 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lhx1P63006 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Lhx1P63006 Gm9870-201ENSMUST00000063874 645 ntBASIC20.45■□□□□ 0.86
Lhx1P63006 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lhx1P63006 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Lhx1P63006 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Lhx1P63006 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lhx1P63006 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Lhx1P63006 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.44■□□□□ 0.86
Lhx1P63006 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lhx1P63006 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lhx1P63006 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lhx1P63006 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lhx1P63006 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.43■□□□□ 0.86
Lhx1P63006 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.43■□□□□ 0.86
Lhx1P63006 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lhx1P63006 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lhx1P63006 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.42■□□□□ 0.86
Lhx1P63006 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Lhx1P63006 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Lhx1P63006 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Lhx1P63006 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lhx1P63006 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.41■□□□□ 0.86
Lhx1P63006 Gm7143-201ENSMUST00000222811 859 ntBASIC20.41■□□□□ 0.86
Lhx1P63006 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lhx1P63006 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.41■□□□□ 0.86
Lhx1P63006 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.41■□□□□ 0.86
Lhx1P63006 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lhx1P63006 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Lhx1P63006 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.4■□□□□ 0.86
Lhx1P63006 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Lhx1P63006 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Lhx1P63006 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.4■□□□□ 0.86
Lhx1P63006 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lhx1P63006 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lhx1P63006 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Lhx1P63006 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lhx1P63006 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lhx1P63006 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lhx1P63006 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.39■□□□□ 0.85
Lhx1P63006 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lhx1P63006 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lhx1P63006 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lhx1P63006 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.39■□□□□ 0.85
Lhx1P63006 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lhx1P63006 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lhx1P63006 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lhx1P63006 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lhx1P63006 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lhx1P63006 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lhx1P63006 Golgb1-201ENSMUST00000023534 498 ntBASIC20.38■□□□□ 0.85
Lhx1P63006 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lhx1P63006 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Lhx1P63006 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Lhx1P63006 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.37■□□□□ 0.85
Lhx1P63006 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.37■□□□□ 0.85
Lhx1P63006 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Lhx1P63006 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Lhx1P63006 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lhx1P63006 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lhx1P63006 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lhx1P63006 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lhx1P63006 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lhx1P63006 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lhx1P63006 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.36■□□□□ 0.85
Lhx1P63006 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lhx1P63006 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lhx1P63006 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.36■□□□□ 0.85
Lhx1P63006 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lhx1P63006 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
Lhx1P63006 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms