Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab4aP56371 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.33■□□□□ 0.2
Rab4aP56371 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab4aP56371 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab4aP56371 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab4aP56371 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab4aP56371 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab4aP56371 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab4aP56371 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rab4aP56371 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab4aP56371 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab4aP56371 Gm24970-201ENSMUST00000175582 82 ntBASIC16.32■□□□□ 0.2
Rab4aP56371 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.32■□□□□ 0.2
Rab4aP56371 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rab4aP56371 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab4aP56371 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab4aP56371 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Rab4aP56371 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab4aP56371 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab4aP56371 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab4aP56371 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rab4aP56371 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab4aP56371 Zfp131-205ENSMUST00000223812 663 ntBASIC16.31■□□□□ 0.2
Rab4aP56371 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rab4aP56371 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab4aP56371 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rab4aP56371 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab4aP56371 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab4aP56371 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.3■□□□□ 0.2
Rab4aP56371 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rab4aP56371 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.3■□□□□ 0.2
Rab4aP56371 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab4aP56371 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Rab4aP56371 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.3■□□□□ 0.2
Rab4aP56371 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.3■□□□□ 0.2
Rab4aP56371 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab4aP56371 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Rab4aP56371 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab4aP56371 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rab4aP56371 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Rab4aP56371 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.3■□□□□ 0.2
Rab4aP56371 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Rab4aP56371 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab4aP56371 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rab4aP56371 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab4aP56371 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab4aP56371 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab4aP56371 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab4aP56371 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rab4aP56371 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Rab4aP56371 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rab4aP56371 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.28■□□□□ 0.2
Rab4aP56371 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rab4aP56371 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab4aP56371 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rab4aP56371 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.28■□□□□ 0.2
Rab4aP56371 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab4aP56371 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rab4aP56371 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab4aP56371 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab4aP56371 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.28■□□□□ 0.2
Rab4aP56371 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab4aP56371 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab4aP56371 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.27■□□□□ 0.2
Rab4aP56371 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab4aP56371 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rab4aP56371 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rab4aP56371 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rab4aP56371 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rab4aP56371 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Rab4aP56371 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab4aP56371 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab4aP56371 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab4aP56371 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab4aP56371 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab4aP56371 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab4aP56371 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab4aP56371 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab4aP56371 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab4aP56371 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab4aP56371 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rab4aP56371 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab4aP56371 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab4aP56371 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
Rab4aP56371 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab4aP56371 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.25■□□□□ 0.19
Rab4aP56371 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab4aP56371 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab4aP56371 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab4aP56371 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab4aP56371 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.25■□□□□ 0.19
Rab4aP56371 Gm9397-201ENSMUST00000200125 605 ntBASIC16.25■□□□□ 0.19
Rab4aP56371 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab4aP56371 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab4aP56371 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rab4aP56371 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.24■□□□□ 0.19
Rab4aP56371 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rab4aP56371 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Rab4aP56371 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rab4aP56371 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms