Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Atxn1P54254 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atxn1P54254 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Atxn1P54254 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atxn1P54254 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atxn1P54254 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atxn1P54254 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.63■□□□□ 0.89
Atxn1P54254 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.63■□□□□ 0.89
Atxn1P54254 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atxn1P54254 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atxn1P54254 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atxn1P54254 Gm27011-201ENSMUST00000182352 972 ntBASIC20.62■□□□□ 0.89
Atxn1P54254 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atxn1P54254 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atxn1P54254 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atxn1P54254 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.62■□□□□ 0.89
Atxn1P54254 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atxn1P54254 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.62■□□□□ 0.89
Atxn1P54254 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atxn1P54254 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atxn1P54254 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atxn1P54254 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Atxn1P54254 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.61■□□□□ 0.89
Atxn1P54254 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Atxn1P54254 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atxn1P54254 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Atxn1P54254 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atxn1P54254 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Atxn1P54254 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atxn1P54254 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.6■□□□□ 0.89
Atxn1P54254 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atxn1P54254 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atxn1P54254 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atxn1P54254 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atxn1P54254 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atxn1P54254 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Atxn1P54254 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atxn1P54254 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atxn1P54254 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atxn1P54254 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atxn1P54254 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atxn1P54254 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atxn1P54254 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atxn1P54254 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atxn1P54254 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atxn1P54254 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Atxn1P54254 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.58■□□□□ 0.89
Atxn1P54254 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Atxn1P54254 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Atxn1P54254 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atxn1P54254 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Atxn1P54254 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atxn1P54254 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Atxn1P54254 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Atxn1P54254 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atxn1P54254 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Atxn1P54254 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Atxn1P54254 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atxn1P54254 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atxn1P54254 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.57■□□□□ 0.88
Atxn1P54254 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atxn1P54254 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.57■□□□□ 0.88
Atxn1P54254 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.56■□□□□ 0.88
Atxn1P54254 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atxn1P54254 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Atxn1P54254 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atxn1P54254 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.56■□□□□ 0.88
Atxn1P54254 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.56■□□□□ 0.88
Atxn1P54254 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atxn1P54254 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atxn1P54254 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atxn1P54254 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atxn1P54254 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atxn1P54254 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Atxn1P54254 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Atxn1P54254 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atxn1P54254 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Atxn1P54254 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atxn1P54254 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atxn1P54254 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atxn1P54254 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Atxn1P54254 Gm8493-201ENSMUST00000196881 489 ntBASIC20.54■□□□□ 0.88
Atxn1P54254 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atxn1P54254 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.54■□□□□ 0.88
Atxn1P54254 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn1P54254 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn1P54254 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Atxn1P54254 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn1P54254 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Atxn1P54254 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Atxn1P54254 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Atxn1P54254 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Atxn1P54254 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.53■□□□□ 0.88
Atxn1P54254 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn1P54254 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn1P54254 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn1P54254 Gm26571-201ENSMUST00000181399 666 ntBASIC20.52■□□□□ 0.88
Atxn1P54254 Gm27405-201ENSMUST00000184201 112 ntBASIC20.52■□□□□ 0.88
Atxn1P54254 Gm42569-201ENSMUST00000200539 472 ntBASIC20.52■□□□□ 0.88
Atxn1P54254 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms