Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sox3P53784 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox3P53784 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox3P53784 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Sox3P53784 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox3P53784 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox3P53784 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox3P53784 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox3P53784 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox3P53784 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox3P53784 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.76■□□□□ 0.75
Sox3P53784 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.76■□□□□ 0.75
Sox3P53784 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox3P53784 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox3P53784 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Sox3P53784 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox3P53784 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.76■□□□□ 0.75
Sox3P53784 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox3P53784 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.75■□□□□ 0.75
Sox3P53784 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox3P53784 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox3P53784 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
Sox3P53784 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.75■□□□□ 0.75
Sox3P53784 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.75■□□□□ 0.75
Sox3P53784 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sox3P53784 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox3P53784 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox3P53784 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.74■□□□□ 0.75
Sox3P53784 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox3P53784 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox3P53784 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.74■□□□□ 0.75
Sox3P53784 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Sox3P53784 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.74■□□□□ 0.75
Sox3P53784 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.74■□□□□ 0.75
Sox3P53784 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.74■□□□□ 0.75
Sox3P53784 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox3P53784 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox3P53784 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox3P53784 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox3P53784 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox3P53784 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox3P53784 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox3P53784 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox3P53784 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox3P53784 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.73■□□□□ 0.75
Sox3P53784 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox3P53784 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Sox3P53784 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox3P53784 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox3P53784 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox3P53784 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Sox3P53784 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sox3P53784 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.72■□□□□ 0.75
Sox3P53784 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
Sox3P53784 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox3P53784 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.71■□□□□ 0.75
Sox3P53784 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox3P53784 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.71■□□□□ 0.75
Sox3P53784 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox3P53784 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sox3P53784 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox3P53784 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox3P53784 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sox3P53784 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
Sox3P53784 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.7■□□□□ 0.74
Sox3P53784 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
Sox3P53784 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.7■□□□□ 0.74
Sox3P53784 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.7■□□□□ 0.74
Sox3P53784 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox3P53784 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Sox3P53784 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox3P53784 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox3P53784 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
Sox3P53784 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.69■□□□□ 0.74
Sox3P53784 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox3P53784 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox3P53784 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox3P53784 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Sox3P53784 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.68■□□□□ 0.74
Sox3P53784 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Sox3P53784 Gm10399-202ENSMUST00000202768 748 ntBASIC19.68■□□□□ 0.74
Sox3P53784 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.68■□□□□ 0.74
Sox3P53784 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Sox3P53784 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox3P53784 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sox3P53784 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox3P53784 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox3P53784 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox3P53784 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.67■□□□□ 0.74
Sox3P53784 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sox3P53784 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Sox3P53784 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox3P53784 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox3P53784 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox3P53784 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox3P53784 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox3P53784 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.66■□□□□ 0.74
Sox3P53784 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox3P53784 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Sox3P53784 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms