Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h1aP43275 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hist1h1aP43275 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h1aP43275 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h1aP43275 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h1aP43275 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h1aP43275 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h1aP43275 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h1aP43275 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h1aP43275 Gm27502-201ENSMUST00000183495 199 ntBASIC17.03■□□□□ 0.32
Hist1h1aP43275 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.03■□□□□ 0.32
Hist1h1aP43275 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h1aP43275 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hist1h1aP43275 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h1aP43275 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h1aP43275 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hist1h1aP43275 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hist1h1aP43275 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hist1h1aP43275 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hist1h1aP43275 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hist1h1aP43275 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Hist1h1aP43275 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hist1h1aP43275 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hist1h1aP43275 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hist1h1aP43275 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hist1h1aP43275 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hist1h1aP43275 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Hist1h1aP43275 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hist1h1aP43275 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hist1h1aP43275 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hist1h1aP43275 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hist1h1aP43275 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hist1h1aP43275 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Hist1h1aP43275 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hist1h1aP43275 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17■□□□□ 0.31
Hist1h1aP43275 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hist1h1aP43275 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hist1h1aP43275 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17■□□□□ 0.31
Hist1h1aP43275 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17■□□□□ 0.31
Hist1h1aP43275 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hist1h1aP43275 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Hist1h1aP43275 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hist1h1aP43275 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Hist1h1aP43275 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hist1h1aP43275 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hist1h1aP43275 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hist1h1aP43275 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hist1h1aP43275 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hist1h1aP43275 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hist1h1aP43275 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hist1h1aP43275 Gm14523-201ENSMUST00000117260 558 ntBASIC16.99■□□□□ 0.31
Hist1h1aP43275 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hist1h1aP43275 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hist1h1aP43275 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hist1h1aP43275 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Hist1h1aP43275 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hist1h1aP43275 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.98■□□□□ 0.31
Hist1h1aP43275 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hist1h1aP43275 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hist1h1aP43275 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hist1h1aP43275 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hist1h1aP43275 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.98■□□□□ 0.31
Hist1h1aP43275 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hist1h1aP43275 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hist1h1aP43275 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hist1h1aP43275 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hist1h1aP43275 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hist1h1aP43275 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hist1h1aP43275 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hist1h1aP43275 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Hist1h1aP43275 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hist1h1aP43275 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hist1h1aP43275 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hist1h1aP43275 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hist1h1aP43275 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hist1h1aP43275 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Hist1h1aP43275 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hist1h1aP43275 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hist1h1aP43275 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hist1h1aP43275 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hist1h1aP43275 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hist1h1aP43275 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hist1h1aP43275 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hist1h1aP43275 Gm7332-201ENSMUST00000118351 454 ntBASIC16.96■□□□□ 0.31
Hist1h1aP43275 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hist1h1aP43275 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.96■□□□□ 0.31
Hist1h1aP43275 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Hist1h1aP43275 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hist1h1aP43275 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Hist1h1aP43275 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hist1h1aP43275 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Hist1h1aP43275 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hist1h1aP43275 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Hist1h1aP43275 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.95■□□□□ 0.3
Hist1h1aP43275 Gm11175-201ENSMUST00000116172 543 ntBASIC16.95■□□□□ 0.3
Hist1h1aP43275 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hist1h1aP43275 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hist1h1aP43275 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hist1h1aP43275 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hist1h1aP43275 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms