Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-2P42586 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-2P42586 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-2P42586 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.16■□□□□ 0.66
Nkx2-2P42586 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.16■□□□□ 0.66
Nkx2-2P42586 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.16■□□□□ 0.66
Nkx2-2P42586 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-2P42586 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-2P42586 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-2P42586 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.15■□□□□ 0.66
Nkx2-2P42586 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.15■□□□□ 0.66
Nkx2-2P42586 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-2P42586 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
Nkx2-2P42586 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.14■□□□□ 0.66
Nkx2-2P42586 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nkx2-2P42586 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nkx2-2P42586 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-2P42586 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Nkx2-2P42586 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-2P42586 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-2P42586 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-2P42586 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-2P42586 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-2P42586 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-2P42586 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-2P42586 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-2P42586 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
Nkx2-2P42586 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-2P42586 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-2P42586 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-2P42586 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-2P42586 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-2P42586 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-2P42586 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx2-2P42586 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx2-2P42586 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx2-2P42586 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Nkx2-2P42586 Gm15820-201ENSMUST00000201566 728 ntBASIC19.12■□□□□ 0.65
Nkx2-2P42586 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx2-2P42586 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx2-2P42586 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx2-2P42586 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Nkx2-2P42586 Gm15546-201ENSMUST00000122095 826 ntBASIC19.11■□□□□ 0.65
Nkx2-2P42586 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Nkx2-2P42586 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx2-2P42586 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx2-2P42586 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.1■□□□□ 0.65
Nkx2-2P42586 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.1■□□□□ 0.65
Nkx2-2P42586 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.1■□□□□ 0.65
Nkx2-2P42586 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx2-2P42586 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Nkx2-2P42586 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx2-2P42586 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx2-2P42586 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx2-2P42586 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx2-2P42586 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
Nkx2-2P42586 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.09■□□□□ 0.65
Nkx2-2P42586 Gm40881-201ENSMUST00000223397 166 ntBASIC19.09■□□□□ 0.65
Nkx2-2P42586 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx2-2P42586 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx2-2P42586 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx2-2P42586 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx2-2P42586 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx2-2P42586 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nkx2-2P42586 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Nkx2-2P42586 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Nkx2-2P42586 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.08■□□□□ 0.64
Nkx2-2P42586 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.08■□□□□ 0.64
Nkx2-2P42586 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.08■□□□□ 0.64
Nkx2-2P42586 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx2-2P42586 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-2P42586 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.07■□□□□ 0.64
Nkx2-2P42586 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-2P42586 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Nkx2-2P42586 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-2P42586 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-2P42586 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-2P42586 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.06■□□□□ 0.64
Nkx2-2P42586 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Nkx2-2P42586 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.06■□□□□ 0.64
Nkx2-2P42586 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-2P42586 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Nkx2-2P42586 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-2P42586 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-2P42586 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-2P42586 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-2P42586 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-2P42586 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-2P42586 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-2P42586 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-2P42586 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-2P42586 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-2P42586 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-2P42586 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-2P42586 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.04■□□□□ 0.64
Nkx2-2P42586 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
Nkx2-2P42586 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.04■□□□□ 0.64
Nkx2-2P42586 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-2P42586 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.04■□□□□ 0.64
Nkx2-2P42586 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms