Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxa1P35582 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Foxa1P35582 Gm40881-201ENSMUST00000223397 166 ntBASIC19.25■□□□□ 0.67
Foxa1P35582 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Foxa1P35582 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxa1P35582 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxa1P35582 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.24■□□□□ 0.67
Foxa1P35582 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxa1P35582 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.24■□□□□ 0.67
Foxa1P35582 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.24■□□□□ 0.67
Foxa1P35582 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxa1P35582 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxa1P35582 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Foxa1P35582 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxa1P35582 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxa1P35582 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxa1P35582 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Foxa1P35582 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Foxa1P35582 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxa1P35582 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxa1P35582 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.23■□□□□ 0.67
Foxa1P35582 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Foxa1P35582 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Foxa1P35582 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxa1P35582 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxa1P35582 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxa1P35582 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxa1P35582 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxa1P35582 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxa1P35582 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxa1P35582 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxa1P35582 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxa1P35582 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxa1P35582 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxa1P35582 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxa1P35582 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxa1P35582 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Foxa1P35582 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Foxa1P35582 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxa1P35582 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxa1P35582 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxa1P35582 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Foxa1P35582 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxa1P35582 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.21■□□□□ 0.67
Foxa1P35582 Gm9959-201ENSMUST00000068277 390 ntBASIC19.21■□□□□ 0.67
Foxa1P35582 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Foxa1P35582 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Foxa1P35582 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Foxa1P35582 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.21■□□□□ 0.67
Foxa1P35582 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Foxa1P35582 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxa1P35582 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.2■□□□□ 0.66
Foxa1P35582 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxa1P35582 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxa1P35582 Etf1-202ENSMUST00000180351 108 ntBASIC19.2■□□□□ 0.66
Foxa1P35582 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.2■□□□□ 0.66
Foxa1P35582 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxa1P35582 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxa1P35582 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Foxa1P35582 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxa1P35582 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxa1P35582 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxa1P35582 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxa1P35582 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxa1P35582 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxa1P35582 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxa1P35582 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxa1P35582 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.18■□□□□ 0.66
Foxa1P35582 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxa1P35582 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.18■□□□□ 0.66
Foxa1P35582 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Foxa1P35582 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxa1P35582 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Foxa1P35582 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.17■□□□□ 0.66
Foxa1P35582 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.17■□□□□ 0.66
Foxa1P35582 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxa1P35582 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxa1P35582 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxa1P35582 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxa1P35582 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Foxa1P35582 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Foxa1P35582 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Foxa1P35582 Gm7417-201ENSMUST00000192950 473 ntBASIC19.16■□□□□ 0.66
Foxa1P35582 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Foxa1P35582 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Foxa1P35582 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.16■□□□□ 0.66
Foxa1P35582 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Foxa1P35582 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Foxa1P35582 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Foxa1P35582 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Foxa1P35582 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.15■□□□□ 0.66
Foxa1P35582 Rps24-207ENSMUST00000224568 714 ntBASIC19.15■□□□□ 0.66
Foxa1P35582 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Foxa1P35582 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.15■□□□□ 0.66
Foxa1P35582 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Foxa1P35582 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Foxa1P35582 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Foxa1P35582 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Foxa1P35582 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Foxa1P35582 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms