Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.42■□□□□ 0.38
Col8a2P25318 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col8a2P25318 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col8a2P25318 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Col8a2P25318 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col8a2P25318 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col8a2P25318 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.41■□□□□ 0.38
Col8a2P25318 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col8a2P25318 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col8a2P25318 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col8a2P25318 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col8a2P25318 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col8a2P25318 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col8a2P25318 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col8a2P25318 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col8a2P25318 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col8a2P25318 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col8a2P25318 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col8a2P25318 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.39■□□□□ 0.38
Col8a2P25318 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.39■□□□□ 0.37
Col8a2P25318 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col8a2P25318 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col8a2P25318 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col8a2P25318 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col8a2P25318 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col8a2P25318 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.38■□□□□ 0.37
Col8a2P25318 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col8a2P25318 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.38■□□□□ 0.37
Col8a2P25318 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col8a2P25318 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col8a2P25318 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col8a2P25318 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col8a2P25318 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col8a2P25318 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Col8a2P25318 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col8a2P25318 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col8a2P25318 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Col8a2P25318 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col8a2P25318 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.37■□□□□ 0.37
Col8a2P25318 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col8a2P25318 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col8a2P25318 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col8a2P25318 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col8a2P25318 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col8a2P25318 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col8a2P25318 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col8a2P25318 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.36■□□□□ 0.37
Col8a2P25318 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Col8a2P25318 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.36■□□□□ 0.37
Col8a2P25318 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col8a2P25318 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Col8a2P25318 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col8a2P25318 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Col8a2P25318 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col8a2P25318 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col8a2P25318 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col8a2P25318 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.35■□□□□ 0.37
Col8a2P25318 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col8a2P25318 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col8a2P25318 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Col8a2P25318 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col8a2P25318 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col8a2P25318 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col8a2P25318 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col8a2P25318 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col8a2P25318 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col8a2P25318 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col8a2P25318 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col8a2P25318 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col8a2P25318 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.34■□□□□ 0.37
Col8a2P25318 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col8a2P25318 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.34■□□□□ 0.37
Col8a2P25318 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col8a2P25318 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col8a2P25318 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col8a2P25318 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col8a2P25318 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col8a2P25318 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col8a2P25318 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col8a2P25318 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Col8a2P25318 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.33■□□□□ 0.36
Col8a2P25318 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.33■□□□□ 0.36
Col8a2P25318 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Col8a2P25318 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col8a2P25318 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col8a2P25318 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col8a2P25318 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col8a2P25318 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Col8a2P25318 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Col8a2P25318 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col8a2P25318 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col8a2P25318 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col8a2P25318 Gm9847-201ENSMUST00000052528 599 ntBASIC17.32■□□□□ 0.36
Col8a2P25318 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col8a2P25318 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col8a2P25318 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col8a2P25318 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col8a2P25318 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col8a2P25318 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col8a2P25318 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms