Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
P20040 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.34■□□□□ 0.53
P20040 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P20040 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.34■□□□□ 0.53
P20040 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
P20040 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
P20040 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P20040 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P20040 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
P20040 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
P20040 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
P20040 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
P20040 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P20040 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
P20040 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
P20040 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.33■□□□□ 0.52
P20040 Gm5812-201ENSMUST00000061073 957 ntBASIC18.33■□□□□ 0.52
P20040 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P20040 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
P20040 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P20040 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.33■□□□□ 0.52
P20040 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
P20040 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P20040 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P20040 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P20040 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
P20040 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
P20040 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
P20040 Gm13238-201ENSMUST00000117655 780 ntBASIC18.32■□□□□ 0.52
P20040 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P20040 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
P20040 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P20040 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
P20040 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P20040 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
P20040 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.31■□□□□ 0.52
P20040 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P20040 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.31■□□□□ 0.52
P20040 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P20040 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P20040 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P20040 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
P20040 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P20040 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P20040 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P20040 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P20040 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P20040 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
P20040 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P20040 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P20040 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P20040 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P20040 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
P20040 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
P20040 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P20040 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P20040 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.29■□□□□ 0.52
P20040 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
P20040 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P20040 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
P20040 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
P20040 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
P20040 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P20040 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P20040 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
P20040 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
P20040 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P20040 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
P20040 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
P20040 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
P20040 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.27■□□□□ 0.52
P20040 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.27■□□□□ 0.52
P20040 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
P20040 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.27■□□□□ 0.52
P20040 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
P20040 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.27■□□□□ 0.51
P20040 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
P20040 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
P20040 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
P20040 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
P20040 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P20040 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
P20040 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P20040 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
P20040 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
P20040 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.26■□□□□ 0.51
P20040 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P20040 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
P20040 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.26■□□□□ 0.51
P20040 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P20040 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P20040 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P20040 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P20040 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P20040 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
P20040 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P20040 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
P20040 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
P20040 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.25■□□□□ 0.51
P20040 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms