Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn1P18608 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn1P18608 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.04■□□□□ 0.64
Hmgn1P18608 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn1P18608 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn1P18608 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn1P18608 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn1P18608 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn1P18608 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn1P18608 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn1P18608 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Hmgn1P18608 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn1P18608 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn1P18608 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn1P18608 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn1P18608 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn1P18608 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn1P18608 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn1P18608 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn1P18608 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn1P18608 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn1P18608 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn1P18608 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn1P18608 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hmgn1P18608 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hmgn1P18608 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.02■□□□□ 0.63
Hmgn1P18608 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn1P18608 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn1P18608 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn1P18608 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn1P18608 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn1P18608 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn1P18608 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn1P18608 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn1P18608 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmgn1P18608 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn1P18608 Gm11687-201ENSMUST00000118911 886 ntBASIC19■□□□□ 0.63
Hmgn1P18608 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn1P18608 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19■□□□□ 0.63
Hmgn1P18608 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Hmgn1P18608 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmgn1P18608 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn1P18608 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn1P18608 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn1P18608 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.99■□□□□ 0.63
Hmgn1P18608 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn1P18608 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn1P18608 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Hmgn1P18608 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Hmgn1P18608 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn1P18608 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn1P18608 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn1P18608 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.98■□□□□ 0.63
Hmgn1P18608 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn1P18608 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn1P18608 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn1P18608 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn1P18608 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn1P18608 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Hmgn1P18608 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgn1P18608 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgn1P18608 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgn1P18608 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgn1P18608 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgn1P18608 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgn1P18608 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgn1P18608 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgn1P18608 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgn1P18608 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgn1P18608 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgn1P18608 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgn1P18608 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgn1P18608 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgn1P18608 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.96■□□□□ 0.63
Hmgn1P18608 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.95■□□□□ 0.62
Hmgn1P18608 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgn1P18608 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Hmgn1P18608 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgn1P18608 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgn1P18608 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgn1P18608 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgn1P18608 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgn1P18608 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgn1P18608 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgn1P18608 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgn1P18608 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgn1P18608 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgn1P18608 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgn1P18608 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.94■□□□□ 0.62
Hmgn1P18608 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgn1P18608 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.94■□□□□ 0.62
Hmgn1P18608 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgn1P18608 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgn1P18608 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgn1P18608 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Hmgn1P18608 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgn1P18608 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgn1P18608 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgn1P18608 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Hmgn1P18608 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms