Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cntn1P12960 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.95■□□□□ 0.78
Cntn1P12960 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cntn1P12960 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cntn1P12960 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cntn1P12960 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.95■□□□□ 0.78
Cntn1P12960 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cntn1P12960 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cntn1P12960 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cntn1P12960 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cntn1P12960 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cntn1P12960 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cntn1P12960 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cntn1P12960 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cntn1P12960 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.94■□□□□ 0.78
Cntn1P12960 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.94■□□□□ 0.78
Cntn1P12960 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cntn1P12960 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.94■□□□□ 0.78
Cntn1P12960 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cntn1P12960 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cntn1P12960 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cntn1P12960 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cntn1P12960 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
Cntn1P12960 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cntn1P12960 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cntn1P12960 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cntn1P12960 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cntn1P12960 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cntn1P12960 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cntn1P12960 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cntn1P12960 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cntn1P12960 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cntn1P12960 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cntn1P12960 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cntn1P12960 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cntn1P12960 Gm9847-201ENSMUST00000052528 599 ntBASIC19.92■□□□□ 0.78
Cntn1P12960 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cntn1P12960 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cntn1P12960 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cntn1P12960 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cntn1P12960 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cntn1P12960 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cntn1P12960 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cntn1P12960 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.91■□□□□ 0.78
Cntn1P12960 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cntn1P12960 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cntn1P12960 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cntn1P12960 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cntn1P12960 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cntn1P12960 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cntn1P12960 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cntn1P12960 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cntn1P12960 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cntn1P12960 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cntn1P12960 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cntn1P12960 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.78
Cntn1P12960 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cntn1P12960 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Cntn1P12960 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cntn1P12960 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cntn1P12960 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.89■□□□□ 0.77
Cntn1P12960 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.89■□□□□ 0.77
Cntn1P12960 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cntn1P12960 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cntn1P12960 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
Cntn1P12960 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cntn1P12960 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cntn1P12960 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cntn1P12960 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cntn1P12960 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cntn1P12960 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cntn1P12960 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cntn1P12960 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cntn1P12960 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.87■□□□□ 0.77
Cntn1P12960 Gm13241-201ENSMUST00000094493 780 ntBASIC19.87■□□□□ 0.77
Cntn1P12960 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cntn1P12960 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cntn1P12960 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.86■□□□□ 0.77
Cntn1P12960 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cntn1P12960 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.86■□□□□ 0.77
Cntn1P12960 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.86■□□□□ 0.77
Cntn1P12960 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.86■□□□□ 0.77
Cntn1P12960 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cntn1P12960 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.86■□□□□ 0.77
Cntn1P12960 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cntn1P12960 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cntn1P12960 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cntn1P12960 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cntn1P12960 Gm12922-201ENSMUST00000120626 809 ntBASIC19.85■□□□□ 0.77
Cntn1P12960 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.85■□□□□ 0.77
Cntn1P12960 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cntn1P12960 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Cntn1P12960 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cntn1P12960 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.85■□□□□ 0.77
Cntn1P12960 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cntn1P12960 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cntn1P12960 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.85■□□□□ 0.77
Cntn1P12960 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.85■□□□□ 0.77
Cntn1P12960 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cntn1P12960 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms