Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tgfb1P04202 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tgfb1P04202 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tgfb1P04202 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tgfb1P04202 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tgfb1P04202 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.26■□□□□ 0.67
Tgfb1P04202 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tgfb1P04202 Gm43566-201ENSMUST00000196851 808 ntBASIC19.26■□□□□ 0.67
Tgfb1P04202 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
Tgfb1P04202 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.26■□□□□ 0.67
Tgfb1P04202 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tgfb1P04202 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tgfb1P04202 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tgfb1P04202 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfb1P04202 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfb1P04202 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.25■□□□□ 0.67
Tgfb1P04202 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfb1P04202 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Tgfb1P04202 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfb1P04202 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfb1P04202 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Tgfb1P04202 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tgfb1P04202 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfb1P04202 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfb1P04202 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Tgfb1P04202 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfb1P04202 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tgfb1P04202 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tgfb1P04202 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tgfb1P04202 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Tgfb1P04202 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tgfb1P04202 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tgfb1P04202 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tgfb1P04202 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tgfb1P04202 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Tgfb1P04202 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tgfb1P04202 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tgfb1P04202 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tgfb1P04202 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tgfb1P04202 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.23■□□□□ 0.67
Tgfb1P04202 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tgfb1P04202 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfb1P04202 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfb1P04202 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfb1P04202 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tgfb1P04202 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.22■□□□□ 0.67
Tgfb1P04202 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.22■□□□□ 0.67
Tgfb1P04202 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.22■□□□□ 0.67
Tgfb1P04202 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfb1P04202 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfb1P04202 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfb1P04202 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfb1P04202 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.22■□□□□ 0.67
Tgfb1P04202 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfb1P04202 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfb1P04202 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfb1P04202 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfb1P04202 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfb1P04202 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Tgfb1P04202 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfb1P04202 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfb1P04202 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfb1P04202 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfb1P04202 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Tgfb1P04202 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfb1P04202 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Tgfb1P04202 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfb1P04202 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfb1P04202 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfb1P04202 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfb1P04202 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.2■□□□□ 0.66
Tgfb1P04202 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Tgfb1P04202 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tgfb1P04202 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfb1P04202 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfb1P04202 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfb1P04202 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tgfb1P04202 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tgfb1P04202 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tgfb1P04202 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.19■□□□□ 0.66
Tgfb1P04202 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tgfb1P04202 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tgfb1P04202 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tgfb1P04202 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Tgfb1P04202 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Tgfb1P04202 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tgfb1P04202 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.18■□□□□ 0.66
Tgfb1P04202 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tgfb1P04202 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tgfb1P04202 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tgfb1P04202 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Tgfb1P04202 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.18■□□□□ 0.66
Tgfb1P04202 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tgfb1P04202 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tgfb1P04202 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tgfb1P04202 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Tgfb1P04202 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Tgfb1P04202 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tgfb1P04202 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Tgfb1P04202 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms