Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gm5921-201ENSMUST00000075898 882 ntBASIC18.47■□□□□ 0.55
Hdac3O88895 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac3O88895 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac3O88895 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac3O88895 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac3O88895 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac3O88895 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac3O88895 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac3O88895 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.46■□□□□ 0.55
Hdac3O88895 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac3O88895 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.46■□□□□ 0.55
Hdac3O88895 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac3O88895 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.46■□□□□ 0.55
Hdac3O88895 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.46■□□□□ 0.55
Hdac3O88895 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac3O88895 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac3O88895 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Hdac3O88895 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac3O88895 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac3O88895 Gm45444-201ENSMUST00000211394 898 ntBASIC18.45■□□□□ 0.54
Hdac3O88895 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.45■□□□□ 0.54
Hdac3O88895 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac3O88895 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac3O88895 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac3O88895 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Hdac3O88895 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac3O88895 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
Hdac3O88895 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Hdac3O88895 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Hdac3O88895 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Hdac3O88895 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac3O88895 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac3O88895 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac3O88895 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Hdac3O88895 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac3O88895 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
Hdac3O88895 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac3O88895 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac3O88895 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac3O88895 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Hdac3O88895 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac3O88895 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.43■□□□□ 0.54
Hdac3O88895 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac3O88895 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac3O88895 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac3O88895 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac3O88895 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Hdac3O88895 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac3O88895 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.42■□□□□ 0.54
Hdac3O88895 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.42■□□□□ 0.54
Hdac3O88895 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac3O88895 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac3O88895 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac3O88895 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.42■□□□□ 0.54
Hdac3O88895 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac3O88895 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac3O88895 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac3O88895 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac3O88895 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Hdac3O88895 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac3O88895 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.41■□□□□ 0.54
Hdac3O88895 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Hdac3O88895 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac3O88895 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac3O88895 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac3O88895 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.41■□□□□ 0.54
Hdac3O88895 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac3O88895 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Hdac3O88895 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.4■□□□□ 0.54
Hdac3O88895 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac3O88895 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac3O88895 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Hdac3O88895 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac3O88895 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac3O88895 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac3O88895 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac3O88895 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac3O88895 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac3O88895 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.39■□□□□ 0.53
Hdac3O88895 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac3O88895 Gm43566-201ENSMUST00000196851 808 ntBASIC18.39■□□□□ 0.53
Hdac3O88895 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac3O88895 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac3O88895 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Hdac3O88895 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac3O88895 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac3O88895 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac3O88895 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac3O88895 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac3O88895 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac3O88895 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac3O88895 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac3O88895 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac3O88895 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac3O88895 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac3O88895 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac3O88895 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.37■□□□□ 0.53
Hdac3O88895 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.37■□□□□ 0.53
Hdac3O88895 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac3O88895 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms