Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hcn1O88704 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hcn1O88704 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hcn1O88704 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hcn1O88704 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hcn1O88704 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hcn1O88704 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.79■□□□□ 0.76
Hcn1O88704 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcn1O88704 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcn1O88704 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcn1O88704 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcn1O88704 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcn1O88704 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcn1O88704 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Hcn1O88704 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Hcn1O88704 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcn1O88704 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.78■□□□□ 0.76
Hcn1O88704 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hcn1O88704 Gm15820-201ENSMUST00000201566 728 ntBASIC19.77■□□□□ 0.76
Hcn1O88704 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Hcn1O88704 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn1O88704 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Hcn1O88704 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn1O88704 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn1O88704 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Hcn1O88704 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn1O88704 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Hcn1O88704 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Hcn1O88704 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn1O88704 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Hcn1O88704 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn1O88704 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Hcn1O88704 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hcn1O88704 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hcn1O88704 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Hcn1O88704 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.75■□□□□ 0.75
Hcn1O88704 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Hcn1O88704 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Hcn1O88704 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Hcn1O88704 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hcn1O88704 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Hcn1O88704 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.74■□□□□ 0.75
Hcn1O88704 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hcn1O88704 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hcn1O88704 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hcn1O88704 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hcn1O88704 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.73■□□□□ 0.75
Hcn1O88704 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
Hcn1O88704 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn1O88704 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn1O88704 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.72■□□□□ 0.75
Hcn1O88704 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn1O88704 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn1O88704 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn1O88704 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.72■□□□□ 0.75
Hcn1O88704 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn1O88704 Gm10232-201ENSMUST00000089221 720 ntBASIC19.72■□□□□ 0.75
Hcn1O88704 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn1O88704 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn1O88704 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn1O88704 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn1O88704 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hcn1O88704 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hcn1O88704 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Hcn1O88704 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hcn1O88704 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hcn1O88704 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.71■□□□□ 0.75
Hcn1O88704 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hcn1O88704 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.71■□□□□ 0.75
Hcn1O88704 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hcn1O88704 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hcn1O88704 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hcn1O88704 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Hcn1O88704 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.7■□□□□ 0.74
Hcn1O88704 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hcn1O88704 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Hcn1O88704 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hcn1O88704 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hcn1O88704 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hcn1O88704 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hcn1O88704 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.7■□□□□ 0.74
Hcn1O88704 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Hcn1O88704 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hcn1O88704 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hcn1O88704 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn1O88704 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn1O88704 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn1O88704 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn1O88704 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn1O88704 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn1O88704 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn1O88704 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn1O88704 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn1O88704 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn1O88704 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn1O88704 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Hcn1O88704 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn1O88704 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hcn1O88704 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.68■□□□□ 0.74
Hcn1O88704 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms