Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1hO88427 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1hO88427 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1hO88427 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.72■□□□□ 0.91
Cacna1hO88427 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.72■□□□□ 0.91
Cacna1hO88427 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1hO88427 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1hO88427 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.71■□□□□ 0.91
Cacna1hO88427 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.71■□□□□ 0.91
Cacna1hO88427 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1hO88427 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1hO88427 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1hO88427 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.71■□□□□ 0.91
Cacna1hO88427 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.71■□□□□ 0.91
Cacna1hO88427 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.71■□□□□ 0.91
Cacna1hO88427 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
Cacna1hO88427 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1hO88427 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1hO88427 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1hO88427 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1hO88427 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.7■□□□□ 0.9
Cacna1hO88427 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.7■□□□□ 0.9
Cacna1hO88427 Gm7143-201ENSMUST00000222811 859 ntBASIC20.7■□□□□ 0.9
Cacna1hO88427 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cacna1hO88427 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1hO88427 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
Cacna1hO88427 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.7■□□□□ 0.9
Cacna1hO88427 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1hO88427 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.7■□□□□ 0.9
Cacna1hO88427 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cacna1hO88427 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1hO88427 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1hO88427 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1hO88427 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.69■□□□□ 0.9
Cacna1hO88427 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1hO88427 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1hO88427 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1hO88427 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Cacna1hO88427 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1hO88427 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1hO88427 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1hO88427 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.68■□□□□ 0.9
Cacna1hO88427 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1hO88427 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1hO88427 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1hO88427 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Cacna1hO88427 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cacna1hO88427 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cacna1hO88427 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cacna1hO88427 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.67■□□□□ 0.9
Cacna1hO88427 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1hO88427 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.66■□□□□ 0.9
Cacna1hO88427 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.66■□□□□ 0.9
Cacna1hO88427 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1hO88427 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1hO88427 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1hO88427 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1hO88427 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1hO88427 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1hO88427 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1hO88427 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.65■□□□□ 0.9
Cacna1hO88427 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.65■□□□□ 0.9
Cacna1hO88427 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1hO88427 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1hO88427 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cacna1hO88427 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.64■□□□□ 0.89
Cacna1hO88427 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.64■□□□□ 0.89
Cacna1hO88427 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1hO88427 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cacna1hO88427 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1hO88427 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1hO88427 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1hO88427 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cacna1hO88427 Gm12527-201ENSMUST00000117967 564 ntBASIC20.64■□□□□ 0.89
Cacna1hO88427 Gm42778-201ENSMUST00000199644 553 ntBASIC20.64■□□□□ 0.89
Cacna1hO88427 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1hO88427 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1hO88427 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Cacna1hO88427 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1hO88427 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1hO88427 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1hO88427 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.62■□□□□ 0.89
Cacna1hO88427 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1hO88427 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1hO88427 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1hO88427 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.62■□□□□ 0.89
Cacna1hO88427 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1hO88427 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1hO88427 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.61■□□□□ 0.89
Cacna1hO88427 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1hO88427 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.61■□□□□ 0.89
Cacna1hO88427 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1hO88427 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Cacna1hO88427 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.61■□□□□ 0.89
Cacna1hO88427 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cacna1hO88427 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1hO88427 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1hO88427 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cacna1hO88427 Gm12441-201ENSMUST00000121806 588 ntBASIC20.6■□□□□ 0.89
Cacna1hO88427 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms