Protein–RNA interactions for Protein: O88410

Cxcr3, C-X-C chemokine receptor type 3, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr3O88410 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcr3O88410 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcr3O88410 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcr3O88410 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcr3O88410 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.87■□□□□ 0.93
Cxcr3O88410 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcr3O88410 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.87■□□□□ 0.93
Cxcr3O88410 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcr3O88410 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcr3O88410 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcr3O88410 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cxcr3O88410 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cxcr3O88410 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cxcr3O88410 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
Cxcr3O88410 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cxcr3O88410 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.86■□□□□ 0.93
Cxcr3O88410 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cxcr3O88410 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cxcr3O88410 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cxcr3O88410 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cxcr3O88410 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cxcr3O88410 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cxcr3O88410 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cxcr3O88410 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cxcr3O88410 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cxcr3O88410 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cxcr3O88410 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cxcr3O88410 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cxcr3O88410 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.84■□□□□ 0.93
Cxcr3O88410 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cxcr3O88410 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Cxcr3O88410 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cxcr3O88410 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cxcr3O88410 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cxcr3O88410 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Cxcr3O88410 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cxcr3O88410 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cxcr3O88410 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Cxcr3O88410 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Cxcr3O88410 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cxcr3O88410 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cxcr3O88410 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cxcr3O88410 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.82■□□□□ 0.92
Cxcr3O88410 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.82■□□□□ 0.92
Cxcr3O88410 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cxcr3O88410 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cxcr3O88410 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Cxcr3O88410 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cxcr3O88410 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cxcr3O88410 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.81■□□□□ 0.92
Cxcr3O88410 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cxcr3O88410 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cxcr3O88410 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.81■□□□□ 0.92
Cxcr3O88410 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cxcr3O88410 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cxcr3O88410 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cxcr3O88410 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Cxcr3O88410 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cxcr3O88410 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cxcr3O88410 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Cxcr3O88410 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cxcr3O88410 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cxcr3O88410 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cxcr3O88410 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cxcr3O88410 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cxcr3O88410 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cxcr3O88410 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cxcr3O88410 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.8■□□□□ 0.92
Cxcr3O88410 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.8■□□□□ 0.92
Cxcr3O88410 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cxcr3O88410 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cxcr3O88410 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cxcr3O88410 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.78■□□□□ 0.92
Cxcr3O88410 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cxcr3O88410 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cxcr3O88410 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cxcr3O88410 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Cxcr3O88410 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cxcr3O88410 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cxcr3O88410 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cxcr3O88410 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cxcr3O88410 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cxcr3O88410 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Cxcr3O88410 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cxcr3O88410 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cxcr3O88410 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cxcr3O88410 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Cxcr3O88410 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cxcr3O88410 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cxcr3O88410 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cxcr3O88410 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.76■□□□□ 0.91
Cxcr3O88410 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cxcr3O88410 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cxcr3O88410 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cxcr3O88410 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cxcr3O88410 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cxcr3O88410 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cxcr3O88410 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cxcr3O88410 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.75■□□□□ 0.91
Cxcr3O88410 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms