Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alx3O70137 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alx3O70137 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alx3O70137 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alx3O70137 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Alx3O70137 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alx3O70137 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Alx3O70137 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Alx3O70137 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Alx3O70137 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alx3O70137 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alx3O70137 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alx3O70137 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alx3O70137 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Alx3O70137 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Alx3O70137 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Alx3O70137 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Alx3O70137 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Alx3O70137 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Alx3O70137 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Alx3O70137 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.78■□□□□ 0.6
Alx3O70137 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Alx3O70137 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Alx3O70137 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Alx3O70137 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Alx3O70137 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Alx3O70137 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Alx3O70137 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Alx3O70137 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Alx3O70137 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Alx3O70137 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Alx3O70137 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Alx3O70137 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Alx3O70137 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Alx3O70137 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Alx3O70137 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx3O70137 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Alx3O70137 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Alx3O70137 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx3O70137 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx3O70137 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Alx3O70137 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.76■□□□□ 0.59
Alx3O70137 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx3O70137 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Alx3O70137 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.75■□□□□ 0.59
Alx3O70137 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx3O70137 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx3O70137 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Alx3O70137 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Alx3O70137 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.74■□□□□ 0.59
Alx3O70137 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.74■□□□□ 0.59
Alx3O70137 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.74■□□□□ 0.59
Alx3O70137 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Alx3O70137 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx3O70137 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Alx3O70137 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx3O70137 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Alx3O70137 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx3O70137 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx3O70137 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx3O70137 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx3O70137 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx3O70137 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx3O70137 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx3O70137 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.73■□□□□ 0.59
Alx3O70137 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.73■□□□□ 0.59
Alx3O70137 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx3O70137 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx3O70137 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Alx3O70137 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Alx3O70137 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.72■□□□□ 0.59
Alx3O70137 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx3O70137 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx3O70137 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Alx3O70137 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx3O70137 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx3O70137 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx3O70137 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx3O70137 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Alx3O70137 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx3O70137 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx3O70137 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Alx3O70137 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx3O70137 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Alx3O70137 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alx3O70137 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
Alx3O70137 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alx3O70137 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Alx3O70137 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.7■□□□□ 0.58
Alx3O70137 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Alx3O70137 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alx3O70137 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Alx3O70137 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Alx3O70137 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx3O70137 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Alx3O70137 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Alx3O70137 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Alx3O70137 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx3O70137 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx3O70137 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms