Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.74■□□□□ 0.91
Ldb2O55203 Gm10399-202ENSMUST00000202768 748 ntBASIC20.74■□□□□ 0.91
Ldb2O55203 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.74■□□□□ 0.91
Ldb2O55203 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.74■□□□□ 0.91
Ldb2O55203 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ldb2O55203 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ldb2O55203 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ldb2O55203 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ldb2O55203 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ldb2O55203 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ldb2O55203 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
Ldb2O55203 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ldb2O55203 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ldb2O55203 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ldb2O55203 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ldb2O55203 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ldb2O55203 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.72■□□□□ 0.91
Ldb2O55203 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ldb2O55203 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ldb2O55203 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ldb2O55203 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ldb2O55203 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ldb2O55203 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ldb2O55203 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ldb2O55203 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ldb2O55203 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Ldb2O55203 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ldb2O55203 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ldb2O55203 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.71■□□□□ 0.91
Ldb2O55203 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.71■□□□□ 0.91
Ldb2O55203 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ldb2O55203 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ldb2O55203 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ldb2O55203 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ldb2O55203 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ldb2O55203 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ldb2O55203 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ldb2O55203 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.7■□□□□ 0.9
Ldb2O55203 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ldb2O55203 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ldb2O55203 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ldb2O55203 Gm15820-201ENSMUST00000201566 728 ntBASIC20.69■□□□□ 0.9
Ldb2O55203 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ldb2O55203 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ldb2O55203 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ldb2O55203 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ldb2O55203 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ldb2O55203 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ldb2O55203 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ldb2O55203 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ldb2O55203 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ldb2O55203 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ldb2O55203 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ldb2O55203 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ldb2O55203 Gm15546-201ENSMUST00000122095 826 ntBASIC20.67■□□□□ 0.9
Ldb2O55203 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ldb2O55203 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ldb2O55203 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ldb2O55203 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ldb2O55203 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ldb2O55203 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ldb2O55203 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ldb2O55203 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ldb2O55203 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ldb2O55203 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ldb2O55203 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ldb2O55203 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ldb2O55203 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ldb2O55203 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ldb2O55203 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ldb2O55203 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ldb2O55203 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.64■□□□□ 0.9
Ldb2O55203 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ldb2O55203 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.64■□□□□ 0.89
Ldb2O55203 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ldb2O55203 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ldb2O55203 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.64■□□□□ 0.89
Ldb2O55203 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.64■□□□□ 0.89
Ldb2O55203 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ldb2O55203 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ldb2O55203 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.63■□□□□ 0.89
Ldb2O55203 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.63■□□□□ 0.89
Ldb2O55203 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.63■□□□□ 0.89
Ldb2O55203 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ldb2O55203 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
Ldb2O55203 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ldb2O55203 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ldb2O55203 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.62■□□□□ 0.89
Ldb2O55203 Gm40881-201ENSMUST00000223397 166 ntBASIC20.62■□□□□ 0.89
Ldb2O55203 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ldb2O55203 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ldb2O55203 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ldb2O55203 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ldb2O55203 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ldb2O55203 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.61■□□□□ 0.89
Ldb2O55203 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ldb2O55203 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.61■□□□□ 0.89
Ldb2O55203 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ldb2O55203 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ldb2O55203 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms