Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kcnu1O54982 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kcnu1O54982 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kcnu1O54982 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Kcnu1O54982 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
Kcnu1O54982 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kcnu1O54982 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Kcnu1O54982 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.21■■□□□ 1.15
Kcnu1O54982 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Kcnu1O54982 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kcnu1O54982 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Kcnu1O54982 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Kcnu1O54982 Hsf1-207ENSMUST00000228371 2102 ntBASIC22.2■■□□□ 1.14
Kcnu1O54982 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Kcnu1O54982 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Kcnu1O54982 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kcnu1O54982 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Kcnu1O54982 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Kcnu1O54982 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kcnu1O54982 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kcnu1O54982 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kcnu1O54982 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Kcnu1O54982 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
Kcnu1O54982 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kcnu1O54982 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Kcnu1O54982 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kcnu1O54982 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kcnu1O54982 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kcnu1O54982 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kcnu1O54982 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kcnu1O54982 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kcnu1O54982 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Kcnu1O54982 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Kcnu1O54982 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kcnu1O54982 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kcnu1O54982 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kcnu1O54982 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.17■■□□□ 1.14
Kcnu1O54982 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Kcnu1O54982 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.17■■□□□ 1.14
Kcnu1O54982 Gm5921-201ENSMUST00000075898 882 ntBASIC22.17■■□□□ 1.14
Kcnu1O54982 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kcnu1O54982 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kcnu1O54982 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.16■■□□□ 1.14
Kcnu1O54982 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kcnu1O54982 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kcnu1O54982 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.16■■□□□ 1.14
Kcnu1O54982 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Kcnu1O54982 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Kcnu1O54982 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.16■■□□□ 1.14
Kcnu1O54982 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Kcnu1O54982 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kcnu1O54982 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kcnu1O54982 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kcnu1O54982 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Kcnu1O54982 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kcnu1O54982 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Kcnu1O54982 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Kcnu1O54982 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kcnu1O54982 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Kcnu1O54982 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Kcnu1O54982 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Kcnu1O54982 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Kcnu1O54982 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Kcnu1O54982 Gm43566-201ENSMUST00000196851 808 ntBASIC22.14■■□□□ 1.13
Kcnu1O54982 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.14■■□□□ 1.13
Kcnu1O54982 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.14■■□□□ 1.13
Kcnu1O54982 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.14■■□□□ 1.13
Kcnu1O54982 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Kcnu1O54982 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Kcnu1O54982 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Kcnu1O54982 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Kcnu1O54982 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Kcnu1O54982 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.13■■□□□ 1.13
Kcnu1O54982 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Kcnu1O54982 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Kcnu1O54982 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.13■■□□□ 1.13
Kcnu1O54982 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.13■■□□□ 1.13
Kcnu1O54982 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Kcnu1O54982 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Kcnu1O54982 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Kcnu1O54982 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Kcnu1O54982 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Kcnu1O54982 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Kcnu1O54982 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Kcnu1O54982 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Kcnu1O54982 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Kcnu1O54982 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.1■■□□□ 1.13
Kcnu1O54982 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Kcnu1O54982 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.1■■□□□ 1.13
Kcnu1O54982 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Kcnu1O54982 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Kcnu1O54982 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.09■■□□□ 1.13
Kcnu1O54982 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Kcnu1O54982 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Kcnu1O54982 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Kcnu1O54982 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Kcnu1O54982 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Kcnu1O54982 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Kcnu1O54982 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Kcnu1O54982 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 160.1 ms