Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kcnu1O54982 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kcnu1O54982 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kcnu1O54982 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Kcnu1O54982 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
Kcnu1O54982 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kcnu1O54982 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Kcnu1O54982 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.21■■□□□ 1.15
Kcnu1O54982 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Kcnu1O54982 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kcnu1O54982 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Kcnu1O54982 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Kcnu1O54982 Hsf1-207ENSMUST00000228371 2102 ntBASIC22.2■■□□□ 1.14
Kcnu1O54982 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Kcnu1O54982 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Kcnu1O54982 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kcnu1O54982 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Kcnu1O54982 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Kcnu1O54982 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kcnu1O54982 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kcnu1O54982 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kcnu1O54982 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Kcnu1O54982 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
Kcnu1O54982 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kcnu1O54982 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Kcnu1O54982 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kcnu1O54982 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kcnu1O54982 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kcnu1O54982 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kcnu1O54982 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kcnu1O54982 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kcnu1O54982 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Kcnu1O54982 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Kcnu1O54982 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kcnu1O54982 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kcnu1O54982 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kcnu1O54982 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.17■■□□□ 1.14
Kcnu1O54982 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Kcnu1O54982 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.17■■□□□ 1.14
Kcnu1O54982 Gm5921-201ENSMUST00000075898 882 ntBASIC22.17■■□□□ 1.14
Kcnu1O54982 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kcnu1O54982 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kcnu1O54982 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.16■■□□□ 1.14
Kcnu1O54982 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kcnu1O54982 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kcnu1O54982 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.16■■□□□ 1.14
Kcnu1O54982 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Kcnu1O54982 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Kcnu1O54982 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.16■■□□□ 1.14
Kcnu1O54982 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Kcnu1O54982 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kcnu1O54982 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kcnu1O54982 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kcnu1O54982 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Kcnu1O54982 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kcnu1O54982 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Kcnu1O54982 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Kcnu1O54982 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kcnu1O54982 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Kcnu1O54982 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Kcnu1O54982 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Kcnu1O54982 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Kcnu1O54982 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Kcnu1O54982 Gm43566-201ENSMUST00000196851 808 ntBASIC22.14■■□□□ 1.13
Kcnu1O54982 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.14■■□□□ 1.13
Kcnu1O54982 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.14■■□□□ 1.13
Kcnu1O54982 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.14■■□□□ 1.13
Kcnu1O54982 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Kcnu1O54982 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Kcnu1O54982 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Kcnu1O54982 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Kcnu1O54982 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Kcnu1O54982 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.13■■□□□ 1.13
Kcnu1O54982 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Kcnu1O54982 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Kcnu1O54982 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.13■■□□□ 1.13
Kcnu1O54982 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.13■■□□□ 1.13
Kcnu1O54982 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Kcnu1O54982 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Kcnu1O54982 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Kcnu1O54982 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Kcnu1O54982 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Kcnu1O54982 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Kcnu1O54982 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Kcnu1O54982 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Kcnu1O54982 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Kcnu1O54982 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.1■■□□□ 1.13
Kcnu1O54982 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Kcnu1O54982 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.1■■□□□ 1.13
Kcnu1O54982 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Kcnu1O54982 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Kcnu1O54982 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.09■■□□□ 1.13
Kcnu1O54982 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Kcnu1O54982 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Kcnu1O54982 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Kcnu1O54982 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Kcnu1O54982 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Kcnu1O54982 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Kcnu1O54982 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Kcnu1O54982 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms