Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.64■□□□□ 0.89
Scamp3O35609 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Scamp3O35609 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
Scamp3O35609 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Scamp3O35609 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Scamp3O35609 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.63■□□□□ 0.89
Scamp3O35609 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.63■□□□□ 0.89
Scamp3O35609 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scamp3O35609 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scamp3O35609 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scamp3O35609 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scamp3O35609 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scamp3O35609 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scamp3O35609 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scamp3O35609 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scamp3O35609 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scamp3O35609 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scamp3O35609 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scamp3O35609 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scamp3O35609 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scamp3O35609 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scamp3O35609 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Scamp3O35609 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scamp3O35609 Gm22238-201ENSMUST00000175222 88 ntBASIC20.6■□□□□ 0.89
Scamp3O35609 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Scamp3O35609 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.6■□□□□ 0.89
Scamp3O35609 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scamp3O35609 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scamp3O35609 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Scamp3O35609 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scamp3O35609 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scamp3O35609 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.59■□□□□ 0.89
Scamp3O35609 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scamp3O35609 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scamp3O35609 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scamp3O35609 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scamp3O35609 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scamp3O35609 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Scamp3O35609 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scamp3O35609 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scamp3O35609 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scamp3O35609 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Scamp3O35609 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.58■□□□□ 0.89
Scamp3O35609 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scamp3O35609 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scamp3O35609 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.58■□□□□ 0.88
Scamp3O35609 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Scamp3O35609 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.57■□□□□ 0.88
Scamp3O35609 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scamp3O35609 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scamp3O35609 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scamp3O35609 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scamp3O35609 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scamp3O35609 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scamp3O35609 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scamp3O35609 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scamp3O35609 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scamp3O35609 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Scamp3O35609 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Scamp3O35609 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.55■□□□□ 0.88
Scamp3O35609 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.55■□□□□ 0.88
Scamp3O35609 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Scamp3O35609 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.55■□□□□ 0.88
Scamp3O35609 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scamp3O35609 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scamp3O35609 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scamp3O35609 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scamp3O35609 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scamp3O35609 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scamp3O35609 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.54■□□□□ 0.88
Scamp3O35609 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scamp3O35609 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Scamp3O35609 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scamp3O35609 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Scamp3O35609 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scamp3O35609 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Scamp3O35609 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scamp3O35609 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scamp3O35609 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scamp3O35609 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.52■□□□□ 0.88
Scamp3O35609 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.52■□□□□ 0.88
Scamp3O35609 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scamp3O35609 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Scamp3O35609 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scamp3O35609 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.52■□□□□ 0.88
Scamp3O35609 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scamp3O35609 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scamp3O35609 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scamp3O35609 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Scamp3O35609 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Scamp3O35609 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scamp3O35609 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scamp3O35609 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scamp3O35609 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scamp3O35609 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Scamp3O35609 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.5■□□□□ 0.87
Scamp3O35609 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.5■□□□□ 0.87
Scamp3O35609 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scamp3O35609 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scamp3O35609 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms