Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cx3cl1O35188 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.49■□□□□ 0.71
Cx3cl1O35188 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cx3cl1O35188 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cx3cl1O35188 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cx3cl1O35188 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cx3cl1O35188 Gm14117-201ENSMUST00000122417 843 ntBASIC19.48■□□□□ 0.71
Cx3cl1O35188 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.48■□□□□ 0.71
Cx3cl1O35188 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.48■□□□□ 0.71
Cx3cl1O35188 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cx3cl1O35188 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cx3cl1O35188 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cx3cl1O35188 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cx3cl1O35188 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.47■□□□□ 0.71
Cx3cl1O35188 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cx3cl1O35188 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cx3cl1O35188 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cx3cl1O35188 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cx3cl1O35188 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cx3cl1O35188 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cx3cl1O35188 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cx3cl1O35188 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cx3cl1O35188 Gm7417-201ENSMUST00000192950 473 ntBASIC19.46■□□□□ 0.71
Cx3cl1O35188 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cx3cl1O35188 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cx3cl1O35188 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cx3cl1O35188 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cx3cl1O35188 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cx3cl1O35188 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cx3cl1O35188 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cx3cl1O35188 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.45■□□□□ 0.7
Cx3cl1O35188 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cx3cl1O35188 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cx3cl1O35188 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cx3cl1O35188 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cx3cl1O35188 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cx3cl1O35188 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cx3cl1O35188 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.44■□□□□ 0.7
Cx3cl1O35188 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cx3cl1O35188 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cx3cl1O35188 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cx3cl1O35188 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cx3cl1O35188 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cx3cl1O35188 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cx3cl1O35188 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cx3cl1O35188 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cx3cl1O35188 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cx3cl1O35188 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cx3cl1O35188 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cx3cl1O35188 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cx3cl1O35188 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cx3cl1O35188 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.43■□□□□ 0.7
Cx3cl1O35188 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.43■□□□□ 0.7
Cx3cl1O35188 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cx3cl1O35188 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cx3cl1O35188 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cx3cl1O35188 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cx3cl1O35188 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cx3cl1O35188 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.42■□□□□ 0.7
Cx3cl1O35188 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.42■□□□□ 0.7
Cx3cl1O35188 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cx3cl1O35188 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cx3cl1O35188 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cx3cl1O35188 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cx3cl1O35188 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cx3cl1O35188 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.42■□□□□ 0.7
Cx3cl1O35188 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cx3cl1O35188 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cx3cl1O35188 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.41■□□□□ 0.7
Cx3cl1O35188 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cx3cl1O35188 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cx3cl1O35188 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cx3cl1O35188 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cx3cl1O35188 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cx3cl1O35188 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cx3cl1O35188 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.4■□□□□ 0.7
Cx3cl1O35188 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cx3cl1O35188 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cx3cl1O35188 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cx3cl1O35188 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cx3cl1O35188 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cx3cl1O35188 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.4■□□□□ 0.7
Cx3cl1O35188 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cx3cl1O35188 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cx3cl1O35188 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cx3cl1O35188 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cx3cl1O35188 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cx3cl1O35188 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Cx3cl1O35188 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.39■□□□□ 0.69
Cx3cl1O35188 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cx3cl1O35188 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.39■□□□□ 0.69
Cx3cl1O35188 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cx3cl1O35188 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cx3cl1O35188 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cx3cl1O35188 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cx3cl1O35188 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Cx3cl1O35188 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.38■□□□□ 0.69
Cx3cl1O35188 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cx3cl1O35188 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.37■□□□□ 0.69
Cx3cl1O35188 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms