Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ercc2O08811 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ercc2O08811 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ercc2O08811 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ercc2O08811 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ercc2O08811 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ercc2O08811 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ercc2O08811 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Ercc2O08811 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.33■■□□□ 1
Ercc2O08811 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
Ercc2O08811 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ercc2O08811 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ercc2O08811 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ercc2O08811 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.32■■□□□ 1
Ercc2O08811 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ercc2O08811 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ercc2O08811 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ercc2O08811 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.31■■□□□ 1
Ercc2O08811 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
Ercc2O08811 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ercc2O08811 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ercc2O08811 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ercc2O08811 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ercc2O08811 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.31■■□□□ 1
Ercc2O08811 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Ercc2O08811 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ercc2O08811 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ercc2O08811 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ercc2O08811 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ercc2O08811 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.3■■□□□ 1
Ercc2O08811 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.3■■□□□ 1
Ercc2O08811 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.3■■□□□ 1
Ercc2O08811 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ercc2O08811 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ercc2O08811 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ercc2O08811 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ercc2O08811 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.29■■□□□ 1
Ercc2O08811 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.29■■□□□ 1
Ercc2O08811 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ercc2O08811 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ercc2O08811 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ercc2O08811 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ercc2O08811 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.28■■□□□ 1
Ercc2O08811 Gm40881-201ENSMUST00000223397 166 ntBASIC21.28■■□□□ 1
Ercc2O08811 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ercc2O08811 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ercc2O08811 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Ercc2O08811 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ercc2O08811 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ercc2O08811 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ercc2O08811 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ercc2O08811 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.27■■□□□ 1
Ercc2O08811 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ercc2O08811 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ercc2O08811 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ercc2O08811 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ercc2O08811 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ercc2O08811 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ercc2O08811 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ercc2O08811 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ercc2O08811 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ercc2O08811 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ercc2O08811 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ercc2O08811 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ercc2O08811 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.26■□□□□ 0.99
Ercc2O08811 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ercc2O08811 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ercc2O08811 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ercc2O08811 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ercc2O08811 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ercc2O08811 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ercc2O08811 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Ercc2O08811 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.24■□□□□ 0.99
Ercc2O08811 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.24■□□□□ 0.99
Ercc2O08811 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.24■□□□□ 0.99
Ercc2O08811 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ercc2O08811 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.24■□□□□ 0.99
Ercc2O08811 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ercc2O08811 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ercc2O08811 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.23■□□□□ 0.99
Ercc2O08811 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ercc2O08811 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ercc2O08811 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.23■□□□□ 0.99
Ercc2O08811 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ercc2O08811 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.23■□□□□ 0.99
Ercc2O08811 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ercc2O08811 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.23■□□□□ 0.99
Ercc2O08811 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ercc2O08811 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.22■□□□□ 0.99
Ercc2O08811 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.22■□□□□ 0.99
Ercc2O08811 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Ercc2O08811 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ercc2O08811 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ercc2O08811 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ercc2O08811 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ercc2O08811 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ercc2O08811 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.21■□□□□ 0.99
Ercc2O08811 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ercc2O08811 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ercc2O08811 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms