Protein–RNA interactions for Protein: J3QPX5

Gm8888, Predicted gene 8888, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm8888J3QPX5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm8888J3QPX5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Gm8888J3QPX5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Gm8888J3QPX5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm8888J3QPX5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gm8888J3QPX5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.62■□□□□ 0.57
Gm8888J3QPX5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm8888J3QPX5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm8888J3QPX5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm8888J3QPX5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm8888J3QPX5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm8888J3QPX5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm8888J3QPX5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm8888J3QPX5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Gm8888J3QPX5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm8888J3QPX5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.61■□□□□ 0.57
Gm8888J3QPX5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm8888J3QPX5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm8888J3QPX5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Gm8888J3QPX5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm8888J3QPX5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm8888J3QPX5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm8888J3QPX5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Gm8888J3QPX5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm8888J3QPX5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm8888J3QPX5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.6■□□□□ 0.57
Gm8888J3QPX5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm8888J3QPX5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm8888J3QPX5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm8888J3QPX5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm8888J3QPX5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm8888J3QPX5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.59■□□□□ 0.57
Gm8888J3QPX5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm8888J3QPX5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm8888J3QPX5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
Gm8888J3QPX5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm8888J3QPX5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm8888J3QPX5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm8888J3QPX5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm8888J3QPX5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm8888J3QPX5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm8888J3QPX5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Gm8888J3QPX5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm8888J3QPX5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Gm8888J3QPX5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.58■□□□□ 0.56
Gm8888J3QPX5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm8888J3QPX5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm8888J3QPX5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm8888J3QPX5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Gm8888J3QPX5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Gm8888J3QPX5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.57■□□□□ 0.56
Gm8888J3QPX5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm8888J3QPX5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm8888J3QPX5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm8888J3QPX5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm8888J3QPX5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm8888J3QPX5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm8888J3QPX5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm8888J3QPX5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm8888J3QPX5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm8888J3QPX5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm8888J3QPX5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm8888J3QPX5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm8888J3QPX5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm8888J3QPX5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Gm8888J3QPX5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm8888J3QPX5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm8888J3QPX5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm8888J3QPX5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm8888J3QPX5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm8888J3QPX5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm8888J3QPX5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm8888J3QPX5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm8888J3QPX5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm8888J3QPX5 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.55■□□□□ 0.56
Gm8888J3QPX5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm8888J3QPX5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm8888J3QPX5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm8888J3QPX5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm8888J3QPX5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm8888J3QPX5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm8888J3QPX5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm8888J3QPX5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm8888J3QPX5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm8888J3QPX5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Gm8888J3QPX5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm8888J3QPX5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm8888J3QPX5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm8888J3QPX5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm8888J3QPX5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Gm8888J3QPX5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm8888J3QPX5 Cap2-205ENSMUST00000225824 1634 ntBASIC18.53■□□□□ 0.56
Gm8888J3QPX5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Gm8888J3QPX5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Gm8888J3QPX5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm8888J3QPX5 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.53■□□□□ 0.56
Gm8888J3QPX5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Gm8888J3QPX5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm8888J3QPX5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.53■□□□□ 0.56
Gm8888J3QPX5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms