Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
9930021J03RikH3BKP8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.42■□□□□ 0.7
9930021J03RikH3BKP8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
9930021J03RikH3BKP8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
9930021J03RikH3BKP8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.42■□□□□ 0.7
9930021J03RikH3BKP8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.42■□□□□ 0.7
9930021J03RikH3BKP8 Gm40881-201ENSMUST00000223397 166 ntBASIC19.42■□□□□ 0.7
9930021J03RikH3BKP8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
9930021J03RikH3BKP8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
9930021J03RikH3BKP8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
9930021J03RikH3BKP8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
9930021J03RikH3BKP8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
9930021J03RikH3BKP8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
9930021J03RikH3BKP8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.41■□□□□ 0.7
9930021J03RikH3BKP8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
9930021J03RikH3BKP8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
9930021J03RikH3BKP8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
9930021J03RikH3BKP8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
9930021J03RikH3BKP8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.41■□□□□ 0.7
9930021J03RikH3BKP8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
9930021J03RikH3BKP8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
9930021J03RikH3BKP8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
9930021J03RikH3BKP8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.4■□□□□ 0.7
9930021J03RikH3BKP8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
9930021J03RikH3BKP8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
9930021J03RikH3BKP8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
9930021J03RikH3BKP8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
9930021J03RikH3BKP8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
9930021J03RikH3BKP8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.39■□□□□ 0.69
9930021J03RikH3BKP8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.39■□□□□ 0.69
9930021J03RikH3BKP8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
9930021J03RikH3BKP8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.39■□□□□ 0.69
9930021J03RikH3BKP8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
9930021J03RikH3BKP8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.38■□□□□ 0.69
9930021J03RikH3BKP8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
9930021J03RikH3BKP8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
9930021J03RikH3BKP8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.38■□□□□ 0.69
9930021J03RikH3BKP8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
9930021J03RikH3BKP8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
9930021J03RikH3BKP8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
9930021J03RikH3BKP8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.38■□□□□ 0.69
9930021J03RikH3BKP8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.37■□□□□ 0.69
9930021J03RikH3BKP8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
9930021J03RikH3BKP8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
9930021J03RikH3BKP8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
9930021J03RikH3BKP8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
9930021J03RikH3BKP8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
9930021J03RikH3BKP8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
9930021J03RikH3BKP8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
9930021J03RikH3BKP8 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.37■□□□□ 0.69
9930021J03RikH3BKP8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.37■□□□□ 0.69
9930021J03RikH3BKP8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.37■□□□□ 0.69
9930021J03RikH3BKP8 Gm22238-201ENSMUST00000175222 88 ntBASIC19.37■□□□□ 0.69
9930021J03RikH3BKP8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
9930021J03RikH3BKP8 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.37■□□□□ 0.69
9930021J03RikH3BKP8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
9930021J03RikH3BKP8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
9930021J03RikH3BKP8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
9930021J03RikH3BKP8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
9930021J03RikH3BKP8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
9930021J03RikH3BKP8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.36■□□□□ 0.69
9930021J03RikH3BKP8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
9930021J03RikH3BKP8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
9930021J03RikH3BKP8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
9930021J03RikH3BKP8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
9930021J03RikH3BKP8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
9930021J03RikH3BKP8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
9930021J03RikH3BKP8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
9930021J03RikH3BKP8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
9930021J03RikH3BKP8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.35■□□□□ 0.69
9930021J03RikH3BKP8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.35■□□□□ 0.69
9930021J03RikH3BKP8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
9930021J03RikH3BKP8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
9930021J03RikH3BKP8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
9930021J03RikH3BKP8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
9930021J03RikH3BKP8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
9930021J03RikH3BKP8 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.34■□□□□ 0.69
9930021J03RikH3BKP8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
9930021J03RikH3BKP8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
9930021J03RikH3BKP8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.34■□□□□ 0.69
9930021J03RikH3BKP8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
9930021J03RikH3BKP8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
9930021J03RikH3BKP8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
9930021J03RikH3BKP8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
9930021J03RikH3BKP8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
9930021J03RikH3BKP8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
9930021J03RikH3BKP8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
9930021J03RikH3BKP8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.34■□□□□ 0.69
9930021J03RikH3BKP8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
9930021J03RikH3BKP8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.34■□□□□ 0.69
9930021J03RikH3BKP8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.33■□□□□ 0.69
9930021J03RikH3BKP8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
9930021J03RikH3BKP8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
9930021J03RikH3BKP8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
9930021J03RikH3BKP8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
9930021J03RikH3BKP8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.33■□□□□ 0.68
9930021J03RikH3BKP8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.33■□□□□ 0.68
9930021J03RikH3BKP8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
9930021J03RikH3BKP8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
9930021J03RikH3BKP8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms