Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4lE9Q2N0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Cpsf4lE9Q2N0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4lE9Q2N0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cpsf4lE9Q2N0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4lE9Q2N0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4lE9Q2N0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4lE9Q2N0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4lE9Q2N0 Gm40881-201ENSMUST00000223397 166 ntBASIC17.66■□□□□ 0.42
Cpsf4lE9Q2N0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4lE9Q2N0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4lE9Q2N0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4lE9Q2N0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4lE9Q2N0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4lE9Q2N0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.66■□□□□ 0.42
Cpsf4lE9Q2N0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4lE9Q2N0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4lE9Q2N0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4lE9Q2N0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4lE9Q2N0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4lE9Q2N0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4lE9Q2N0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.65■□□□□ 0.42
Cpsf4lE9Q2N0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4lE9Q2N0 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.65■□□□□ 0.42
Cpsf4lE9Q2N0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4lE9Q2N0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4lE9Q2N0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4lE9Q2N0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4lE9Q2N0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4lE9Q2N0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4lE9Q2N0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4lE9Q2N0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.64■□□□□ 0.41
Cpsf4lE9Q2N0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cpsf4lE9Q2N0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.64■□□□□ 0.41
Cpsf4lE9Q2N0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4lE9Q2N0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cpsf4lE9Q2N0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4lE9Q2N0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4lE9Q2N0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4lE9Q2N0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Cpsf4lE9Q2N0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf4lE9Q2N0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf4lE9Q2N0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf4lE9Q2N0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf4lE9Q2N0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf4lE9Q2N0 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.63■□□□□ 0.41
Cpsf4lE9Q2N0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf4lE9Q2N0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf4lE9Q2N0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.62■□□□□ 0.41
Cpsf4lE9Q2N0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.62■□□□□ 0.41
Cpsf4lE9Q2N0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.62■□□□□ 0.41
Cpsf4lE9Q2N0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf4lE9Q2N0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Cpsf4lE9Q2N0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf4lE9Q2N0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf4lE9Q2N0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf4lE9Q2N0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf4lE9Q2N0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.61■□□□□ 0.41
Cpsf4lE9Q2N0 Gm9959-201ENSMUST00000068277 390 ntBASIC17.61■□□□□ 0.41
Cpsf4lE9Q2N0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.61■□□□□ 0.41
Cpsf4lE9Q2N0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf4lE9Q2N0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.6■□□□□ 0.41
Cpsf4lE9Q2N0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4lE9Q2N0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4lE9Q2N0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4lE9Q2N0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4lE9Q2N0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.6■□□□□ 0.41
Cpsf4lE9Q2N0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4lE9Q2N0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4lE9Q2N0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cpsf4lE9Q2N0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4lE9Q2N0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4lE9Q2N0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4lE9Q2N0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4lE9Q2N0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4lE9Q2N0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4lE9Q2N0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4lE9Q2N0 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.59■□□□□ 0.41
Cpsf4lE9Q2N0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cpsf4lE9Q2N0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Cpsf4lE9Q2N0 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.58■□□□□ 0.4
Cpsf4lE9Q2N0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.58■□□□□ 0.4
Cpsf4lE9Q2N0 Etf1-202ENSMUST00000180351 108 ntBASIC17.58■□□□□ 0.4
Cpsf4lE9Q2N0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpsf4lE9Q2N0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpsf4lE9Q2N0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpsf4lE9Q2N0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.58■□□□□ 0.4
Cpsf4lE9Q2N0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cpsf4lE9Q2N0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4lE9Q2N0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.57■□□□□ 0.4
Cpsf4lE9Q2N0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4lE9Q2N0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4lE9Q2N0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4lE9Q2N0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Cpsf4lE9Q2N0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4lE9Q2N0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4lE9Q2N0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.56■□□□□ 0.4
Cpsf4lE9Q2N0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4lE9Q2N0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4lE9Q2N0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms