Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Gm37179-201ENSMUST00000194862 823 ntBASIC18.73■□□□□ 0.59
Dchs1E9PVD3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.73■□□□□ 0.59
Dchs1E9PVD3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dchs1E9PVD3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Dchs1E9PVD3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.73■□□□□ 0.59
Dchs1E9PVD3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dchs1E9PVD3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dchs1E9PVD3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dchs1E9PVD3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dchs1E9PVD3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Dchs1E9PVD3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.72■□□□□ 0.59
Dchs1E9PVD3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dchs1E9PVD3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Dchs1E9PVD3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dchs1E9PVD3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dchs1E9PVD3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dchs1E9PVD3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dchs1E9PVD3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dchs1E9PVD3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Dchs1E9PVD3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dchs1E9PVD3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dchs1E9PVD3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Dchs1E9PVD3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Dchs1E9PVD3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dchs1E9PVD3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dchs1E9PVD3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dchs1E9PVD3 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.69■□□□□ 0.58
Dchs1E9PVD3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dchs1E9PVD3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Dchs1E9PVD3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dchs1E9PVD3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dchs1E9PVD3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Dchs1E9PVD3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dchs1E9PVD3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dchs1E9PVD3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dchs1E9PVD3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Dchs1E9PVD3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Dchs1E9PVD3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dchs1E9PVD3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Dchs1E9PVD3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dchs1E9PVD3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.68■□□□□ 0.58
Dchs1E9PVD3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Dchs1E9PVD3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dchs1E9PVD3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dchs1E9PVD3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Dchs1E9PVD3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Dchs1E9PVD3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Dchs1E9PVD3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dchs1E9PVD3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Dchs1E9PVD3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.68■□□□□ 0.58
Dchs1E9PVD3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dchs1E9PVD3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dchs1E9PVD3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Dchs1E9PVD3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.67■□□□□ 0.58
Dchs1E9PVD3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dchs1E9PVD3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dchs1E9PVD3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Dchs1E9PVD3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Dchs1E9PVD3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dchs1E9PVD3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Dchs1E9PVD3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Dchs1E9PVD3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Dchs1E9PVD3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dchs1E9PVD3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dchs1E9PVD3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Dchs1E9PVD3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dchs1E9PVD3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dchs1E9PVD3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Dchs1E9PVD3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dchs1E9PVD3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Dchs1E9PVD3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dchs1E9PVD3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dchs1E9PVD3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.65■□□□□ 0.58
Dchs1E9PVD3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dchs1E9PVD3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dchs1E9PVD3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Dchs1E9PVD3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dchs1E9PVD3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dchs1E9PVD3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dchs1E9PVD3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Dchs1E9PVD3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Dchs1E9PVD3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Dchs1E9PVD3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dchs1E9PVD3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Dchs1E9PVD3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Dchs1E9PVD3 Spcs1-204ENSMUST00000226782 949 ntBASIC18.64■□□□□ 0.58
Dchs1E9PVD3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Dchs1E9PVD3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.64■□□□□ 0.58
Dchs1E9PVD3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.64■□□□□ 0.57
Dchs1E9PVD3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dchs1E9PVD3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Dchs1E9PVD3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Dchs1E9PVD3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.64■□□□□ 0.57
Dchs1E9PVD3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dchs1E9PVD3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dchs1E9PVD3 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.63■□□□□ 0.57
Dchs1E9PVD3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dchs1E9PVD3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.63■□□□□ 0.57
Dchs1E9PVD3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dchs1E9PVD3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms