Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd6A3KFM7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd6A3KFM7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd6A3KFM7 Gm13836-201ENSMUST00000121159 501 ntBASIC17.35■□□□□ 0.37
Chd6A3KFM7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd6A3KFM7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Chd6A3KFM7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Chd6A3KFM7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Chd6A3KFM7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.35■□□□□ 0.37
Chd6A3KFM7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.35■□□□□ 0.37
Chd6A3KFM7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd6A3KFM7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.34■□□□□ 0.37
Chd6A3KFM7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd6A3KFM7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd6A3KFM7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.34■□□□□ 0.37
Chd6A3KFM7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd6A3KFM7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd6A3KFM7 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.34■□□□□ 0.37
Chd6A3KFM7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd6A3KFM7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.34■□□□□ 0.37
Chd6A3KFM7 Gm42778-201ENSMUST00000199644 553 ntBASIC17.34■□□□□ 0.37
Chd6A3KFM7 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.33■□□□□ 0.36
Chd6A3KFM7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chd6A3KFM7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd6A3KFM7 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.32■□□□□ 0.36
Chd6A3KFM7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.32■□□□□ 0.36
Chd6A3KFM7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd6A3KFM7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.32■□□□□ 0.36
Chd6A3KFM7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd6A3KFM7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Chd6A3KFM7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.31■□□□□ 0.36
Chd6A3KFM7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.31■□□□□ 0.36
Chd6A3KFM7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chd6A3KFM7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd6A3KFM7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.31■□□□□ 0.36
Chd6A3KFM7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.31■□□□□ 0.36
Chd6A3KFM7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd6A3KFM7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd6A3KFM7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd6A3KFM7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Chd6A3KFM7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.3■□□□□ 0.36
Chd6A3KFM7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Chd6A3KFM7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Chd6A3KFM7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd6A3KFM7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd6A3KFM7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd6A3KFM7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Chd6A3KFM7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Chd6A3KFM7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.29■□□□□ 0.36
Chd6A3KFM7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd6A3KFM7 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.29■□□□□ 0.36
Chd6A3KFM7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chd6A3KFM7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.29■□□□□ 0.36
Chd6A3KFM7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd6A3KFM7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd6A3KFM7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd6A3KFM7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd6A3KFM7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd6A3KFM7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.28■□□□□ 0.36
Chd6A3KFM7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd6A3KFM7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Chd6A3KFM7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.28■□□□□ 0.36
Chd6A3KFM7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Chd6A3KFM7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Chd6A3KFM7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd6A3KFM7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Chd6A3KFM7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd6A3KFM7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd6A3KFM7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd6A3KFM7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Chd6A3KFM7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd6A3KFM7 Gm4968-201ENSMUST00000071458 858 ntBASIC17.26■□□□□ 0.35
Chd6A3KFM7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd6A3KFM7 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.26■□□□□ 0.35
Chd6A3KFM7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Chd6A3KFM7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Chd6A3KFM7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd6A3KFM7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd6A3KFM7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.25■□□□□ 0.35
Chd6A3KFM7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chd6A3KFM7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chd6A3KFM7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chd6A3KFM7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Chd6A3KFM7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.24■□□□□ 0.35
Chd6A3KFM7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chd6A3KFM7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Chd6A3KFM7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd6A3KFM7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.23■□□□□ 0.35
Chd6A3KFM7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd6A3KFM7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd6A3KFM7 Gm10819-201ENSMUST00000099988 561 ntBASIC17.23■□□□□ 0.35
Chd6A3KFM7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.23■□□□□ 0.35
Chd6A3KFM7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd6A3KFM7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.22■□□□□ 0.35
Chd6A3KFM7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Chd6A3KFM7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd6A3KFM7 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.22■□□□□ 0.35
Chd6A3KFM7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Chd6A3KFM7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd6A3KFM7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms