Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.74■□□□□ 0.27
Trav12d-1A0N8R0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12d-1A0N8R0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12d-1A0N8R0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12d-1A0N8R0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12d-1A0N8R0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.73■□□□□ 0.27
Trav12d-1A0N8R0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12d-1A0N8R0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12d-1A0N8R0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12d-1A0N8R0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12d-1A0N8R0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Trav12d-1A0N8R0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12d-1A0N8R0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12d-1A0N8R0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12d-1A0N8R0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12d-1A0N8R0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12d-1A0N8R0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12d-1A0N8R0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12d-1A0N8R0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12d-1A0N8R0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12d-1A0N8R0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12d-1A0N8R0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.72■□□□□ 0.27
Trav12d-1A0N8R0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12d-1A0N8R0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav12d-1A0N8R0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12d-1A0N8R0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12d-1A0N8R0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12d-1A0N8R0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.71■□□□□ 0.27
Trav12d-1A0N8R0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.71■□□□□ 0.27
Trav12d-1A0N8R0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12d-1A0N8R0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12d-1A0N8R0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12d-1A0N8R0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12d-1A0N8R0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav12d-1A0N8R0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12d-1A0N8R0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12d-1A0N8R0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12d-1A0N8R0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12d-1A0N8R0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav12d-1A0N8R0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12d-1A0N8R0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12d-1A0N8R0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12d-1A0N8R0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trav12d-1A0N8R0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav12d-1A0N8R0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12d-1A0N8R0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12d-1A0N8R0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12d-1A0N8R0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12d-1A0N8R0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12d-1A0N8R0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12d-1A0N8R0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12d-1A0N8R0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12d-1A0N8R0 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.69■□□□□ 0.26
Trav12d-1A0N8R0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12d-1A0N8R0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav12d-1A0N8R0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12d-1A0N8R0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12d-1A0N8R0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav12d-1A0N8R0 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.68■□□□□ 0.26
Trav12d-1A0N8R0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12d-1A0N8R0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12d-1A0N8R0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12d-1A0N8R0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12d-1A0N8R0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-1A0N8R0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav12d-1A0N8R0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12d-1A0N8R0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav12d-1A0N8R0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12d-1A0N8R0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trav12d-1A0N8R0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav12d-1A0N8R0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12d-1A0N8R0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav12d-1A0N8R0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav12d-1A0N8R0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12d-1A0N8R0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12d-1A0N8R0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12d-1A0N8R0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.65■□□□□ 0.26
Trav12d-1A0N8R0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav12d-1A0N8R0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12d-1A0N8R0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12d-1A0N8R0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12d-1A0N8R0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms