Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC24.83■■□□□ 1.57
Cfap99A0A140LIX9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC24.83■■□□□ 1.57
Cfap99A0A140LIX9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
Cfap99A0A140LIX9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Cfap99A0A140LIX9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC24.83■■□□□ 1.57
Cfap99A0A140LIX9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Cfap99A0A140LIX9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Cfap99A0A140LIX9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Cfap99A0A140LIX9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Cfap99A0A140LIX9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.82■■□□□ 1.56
Cfap99A0A140LIX9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Cfap99A0A140LIX9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Cfap99A0A140LIX9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Cfap99A0A140LIX9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC24.81■■□□□ 1.56
Cfap99A0A140LIX9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cfap99A0A140LIX9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cfap99A0A140LIX9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC24.81■■□□□ 1.56
Cfap99A0A140LIX9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cfap99A0A140LIX9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cfap99A0A140LIX9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC24.8■■□□□ 1.56
Cfap99A0A140LIX9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Cfap99A0A140LIX9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Cfap99A0A140LIX9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC24.8■■□□□ 1.56
Cfap99A0A140LIX9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Cfap99A0A140LIX9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Cfap99A0A140LIX9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Cfap99A0A140LIX9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Cfap99A0A140LIX9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Cfap99A0A140LIX9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Cfap99A0A140LIX9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC24.79■■□□□ 1.56
Cfap99A0A140LIX9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Cfap99A0A140LIX9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Cfap99A0A140LIX9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Cfap99A0A140LIX9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Cfap99A0A140LIX9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC24.79■■□□□ 1.56
Cfap99A0A140LIX9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.79■■□□□ 1.56
Cfap99A0A140LIX9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cfap99A0A140LIX9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cfap99A0A140LIX9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Cfap99A0A140LIX9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Cfap99A0A140LIX9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cfap99A0A140LIX9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cfap99A0A140LIX9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cfap99A0A140LIX9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Cfap99A0A140LIX9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Cfap99A0A140LIX9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cfap99A0A140LIX9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cfap99A0A140LIX9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC24.78■■□□□ 1.56
Cfap99A0A140LIX9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cfap99A0A140LIX9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cfap99A0A140LIX9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cfap99A0A140LIX9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC24.77■■□□□ 1.56
Cfap99A0A140LIX9 Gm27454-201ENSMUST00000185090 204 ntBASIC24.77■■□□□ 1.56
Cfap99A0A140LIX9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC24.77■■□□□ 1.56
Cfap99A0A140LIX9 Golgb1-201ENSMUST00000023534 498 ntBASIC24.77■■□□□ 1.56
Cfap99A0A140LIX9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
Cfap99A0A140LIX9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC24.77■■□□□ 1.56
Cfap99A0A140LIX9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cfap99A0A140LIX9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cfap99A0A140LIX9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cfap99A0A140LIX9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Cfap99A0A140LIX9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC24.76■■□□□ 1.55
Cfap99A0A140LIX9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Cfap99A0A140LIX9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cfap99A0A140LIX9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cfap99A0A140LIX9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Cfap99A0A140LIX9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Cfap99A0A140LIX9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.75■■□□□ 1.55
Cfap99A0A140LIX9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC24.75■■□□□ 1.55
Cfap99A0A140LIX9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC24.75■■□□□ 1.55
Cfap99A0A140LIX9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC24.75■■□□□ 1.55
Cfap99A0A140LIX9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cfap99A0A140LIX9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cfap99A0A140LIX9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cfap99A0A140LIX9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cfap99A0A140LIX9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cfap99A0A140LIX9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC24.74■■□□□ 1.55
Cfap99A0A140LIX9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Cfap99A0A140LIX9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cfap99A0A140LIX9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cfap99A0A140LIX9 Gm13042-201ENSMUST00000119244 1955 ntBASIC24.74■■□□□ 1.55
Cfap99A0A140LIX9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Cfap99A0A140LIX9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Cfap99A0A140LIX9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC24.73■■□□□ 1.55
Cfap99A0A140LIX9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC24.73■■□□□ 1.55
Cfap99A0A140LIX9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Cfap99A0A140LIX9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC24.73■■□□□ 1.55
Cfap99A0A140LIX9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Cfap99A0A140LIX9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Cfap99A0A140LIX9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cfap99A0A140LIX9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Cfap99A0A140LIX9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
Cfap99A0A140LIX9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cfap99A0A140LIX9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cfap99A0A140LIX9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Cfap99A0A140LIX9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Cfap99A0A140LIX9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cfap99A0A140LIX9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cfap99A0A140LIX9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cfap99A0A140LIX9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC24.71■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms