Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-4A0A0G2JG37 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-4A0A0G2JG37 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.17□□□□□ -0.14
Trav9d-4A0A0G2JG37 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-4A0A0G2JG37 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.17□□□□□ -0.14
Trav9d-4A0A0G2JG37 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-4A0A0G2JG37 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-4A0A0G2JG37 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-4A0A0G2JG37 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav9d-4A0A0G2JG37 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC14.17□□□□□ -0.14
Trav9d-4A0A0G2JG37 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav9d-4A0A0G2JG37 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav9d-4A0A0G2JG37 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-4A0A0G2JG37 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-4A0A0G2JG37 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-4A0A0G2JG37 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav9d-4A0A0G2JG37 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-4A0A0G2JG37 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav9d-4A0A0G2JG37 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-4A0A0G2JG37 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-4A0A0G2JG37 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-4A0A0G2JG37 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav9d-4A0A0G2JG37 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav9d-4A0A0G2JG37 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-4A0A0G2JG37 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-4A0A0G2JG37 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-4A0A0G2JG37 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Trav9d-4A0A0G2JG37 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-4A0A0G2JG37 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-4A0A0G2JG37 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-4A0A0G2JG37 Gm11599-201ENSMUST00000118720 878 ntBASIC14.15□□□□□ -0.14
Trav9d-4A0A0G2JG37 AC154454.1-201ENSMUST00000225253 216 ntBASIC14.15□□□□□ -0.14
Trav9d-4A0A0G2JG37 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-4A0A0G2JG37 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-4A0A0G2JG37 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Trav9d-4A0A0G2JG37 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
Trav9d-4A0A0G2JG37 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-4A0A0G2JG37 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-4A0A0G2JG37 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-4A0A0G2JG37 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-4A0A0G2JG37 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-4A0A0G2JG37 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-4A0A0G2JG37 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-4A0A0G2JG37 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-4A0A0G2JG37 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav9d-4A0A0G2JG37 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-4A0A0G2JG37 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-4A0A0G2JG37 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-4A0A0G2JG37 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-4A0A0G2JG37 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-4A0A0G2JG37 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-4A0A0G2JG37 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-4A0A0G2JG37 Gm45364-201ENSMUST00000210883 159 ntBASIC14.13□□□□□ -0.15
Trav9d-4A0A0G2JG37 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-4A0A0G2JG37 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-4A0A0G2JG37 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9d-4A0A0G2JG37 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trav9d-4A0A0G2JG37 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9d-4A0A0G2JG37 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav9d-4A0A0G2JG37 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9d-4A0A0G2JG37 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9d-4A0A0G2JG37 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav9d-4A0A0G2JG37 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9d-4A0A0G2JG37 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9d-4A0A0G2JG37 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9d-4A0A0G2JG37 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.11□□□□□ -0.15
Trav9d-4A0A0G2JG37 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-4A0A0G2JG37 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-4A0A0G2JG37 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-4A0A0G2JG37 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.11□□□□□ -0.15
Trav9d-4A0A0G2JG37 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-4A0A0G2JG37 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-4A0A0G2JG37 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-4A0A0G2JG37 Iqck-206ENSMUST00000208658 2891 ntBASIC14.11□□□□□ -0.15
Trav9d-4A0A0G2JG37 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-4A0A0G2JG37 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav9d-4A0A0G2JG37 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9d-4A0A0G2JG37 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9d-4A0A0G2JG37 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9d-4A0A0G2JG37 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9d-4A0A0G2JG37 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9d-4A0A0G2JG37 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9d-4A0A0G2JG37 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms