Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.23□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-4A0A0G2JFX3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-4A0A0G2JFX3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trav13d-4A0A0G2JFX3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Gm27502-201ENSMUST00000183495 199 ntBASIC14.17□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms