Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.08■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav9n-2A0A0G2JDP3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9n-2A0A0G2JDP3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav9n-2A0A0G2JDP3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9n-2A0A0G2JDP3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9n-2A0A0G2JDP3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav9n-2A0A0G2JDP3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.08■□□□□ 0
Trav9n-2A0A0G2JDP3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9n-2A0A0G2JDP3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9n-2A0A0G2JDP3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Trav9n-2A0A0G2JDP3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav9n-2A0A0G2JDP3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9n-2A0A0G2JDP3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9n-2A0A0G2JDP3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9n-2A0A0G2JDP3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav9n-2A0A0G2JDP3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9n-2A0A0G2JDP3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav9n-2A0A0G2JDP3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9n-2A0A0G2JDP3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav9n-2A0A0G2JDP3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav9n-2A0A0G2JDP3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.07■□□□□ 0
Trav9n-2A0A0G2JDP3 Gm5921-201ENSMUST00000075898 882 ntBASIC15.07■□□□□ 0
Trav9n-2A0A0G2JDP3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9n-2A0A0G2JDP3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9n-2A0A0G2JDP3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9n-2A0A0G2JDP3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9n-2A0A0G2JDP3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9n-2A0A0G2JDP3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav9n-2A0A0G2JDP3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9n-2A0A0G2JDP3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9n-2A0A0G2JDP3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9n-2A0A0G2JDP3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Trav9n-2A0A0G2JDP3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9n-2A0A0G2JDP3 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.06■□□□□ 0
Trav9n-2A0A0G2JDP3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav9n-2A0A0G2JDP3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.05■□□□□ -0
Trav9n-2A0A0G2JDP3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.05■□□□□ -0
Trav9n-2A0A0G2JDP3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav9n-2A0A0G2JDP3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9n-2A0A0G2JDP3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9n-2A0A0G2JDP3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9n-2A0A0G2JDP3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Trav9n-2A0A0G2JDP3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9n-2A0A0G2JDP3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav9n-2A0A0G2JDP3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9n-2A0A0G2JDP3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9n-2A0A0G2JDP3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9n-2A0A0G2JDP3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9n-2A0A0G2JDP3 Gm13238-201ENSMUST00000117655 780 ntBASIC15.04■□□□□ -0
Trav9n-2A0A0G2JDP3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav9n-2A0A0G2JDP3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9n-2A0A0G2JDP3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9n-2A0A0G2JDP3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9n-2A0A0G2JDP3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9n-2A0A0G2JDP3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9n-2A0A0G2JDP3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.03■□□□□ -0
Trav9n-2A0A0G2JDP3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9n-2A0A0G2JDP3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav9n-2A0A0G2JDP3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9n-2A0A0G2JDP3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9n-2A0A0G2JDP3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Trav9n-2A0A0G2JDP3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9n-2A0A0G2JDP3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav9n-2A0A0G2JDP3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.03■□□□□ -0
Trav9n-2A0A0G2JDP3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9n-2A0A0G2JDP3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9n-2A0A0G2JDP3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Trav9n-2A0A0G2JDP3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9n-2A0A0G2JDP3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav9n-2A0A0G2JDP3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.02■□□□□ -0
Trav9n-2A0A0G2JDP3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.02■□□□□ -0
Trav9n-2A0A0G2JDP3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav9n-2A0A0G2JDP3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.01□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9n-2A0A0G2JDP3 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.01□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Gm43566-201ENSMUST00000196851 808 ntBASIC15□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9n-2A0A0G2JDP3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms